Corynebacterium rouxii: FRC0190_01806
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Entry
FRC0190_01806 CDS
T06840
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
crf
Corynebacterium rouxii
Pathway
crf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRC0190_01806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crf03019
]
FRC0190_01806
03009 Ribosome biogenesis [BR:
crf03009
]
FRC0190_01806
Enzymes [BR:
crf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FRC0190_01806
Messenger RNA biogenesis [BR:
crf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FRC0190_01806
Ribosome biogenesis [BR:
crf03009
]
Prokaryotic type
rRNA processing factors
FRC0190_01806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
VZH85874
UniProt:
A0A6I8MHX1
LinkDB
All DBs
Position
1:complement(1820911..1823856)
Genome browser
AA seq
981 aa
AA seq
DB search
MAEKSKKTTKNQAVSSPIGQAVAALDRSIIGEKIRVHILAKQLGVASKELIAQLATMGLK
KVAQSTLNNQEANQLLDSFVPAQQESDEKLRYRVEKNVENEIAQIEAKVNRDLEEAAAND
HGVADSEEAKLRYRVEKNVDNEVEQIKQQVERELSQRSAEIEDFHEVIELEKEAEPLEDV
EPESAPAPASVSYSVPLFIAPTVVDVVDDEIEEAEDDEDGEDDTDDDSTHAKRRRRGRRG
TGRGKGVDDSAEIVEAEDVDEHEAEEITEPVGIKGSTRLEAQRRRRAELREESKKKRHIV
SEAEFLARRESVTRTMVVRERDRVDHHGMVTQVGVLEDGMLVEHFVTSEAQASMIGNIYL
GRVQNVLPSMEAAFIDIGKGRNGVLYAGEVDWRAAGLGGRGRRIEQALKSGDQVLVQVAK
DPIGHKGARLTTQISFAGRYLVYVPGGRTAGISRKLPAPERKRLKEILKEVVPHDGGAII
RTAAENVSAEAIGADVNRLHKLWDKIQQRTEEEKASKGAKPVTMYEEPNMLVKVVRDLFN
EDFTSLVIDGDRAWNTVHAYVQSVAPDLLDRLVRFDRSEHEGRDAFEVHRVNEQIKKALS
RKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEETVTKNNLEAAEEIVRQMRLRDL
GGMIVVDFIDMVLPENQDLVLRRLTEALGRDRTRHQVSEVTSLGLVQMTRKRLGTGLLET
FATECPHCEGRGVIIHDDPVEQRDADVAMEKSHRARNDRKKNKNHTPSEHLAAAAMHEEK
KKVSIEDLVAAVVIEDDPQPEPDVVPTPADVDVMDIVSAALDRAYEEDPDEPSGSDYLPL
EEKPQTYAEALKEFERSPRRKRKTRGNSVSDVPPRKADFEKSEPQPEPQPQPQPEPEAVV
EKISSRGRRRAVRRTVVEAAPEVVAPTETVESSRGRRRAVRKKMAAQSVQAEPVVEDKRE
VSAPSQGGRGRRRASRRATRR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaaaagtccaagaaaacaaccaaaaaccaagctgtatcttcgccgattggccaa
gcagtagctgcattggatcgctcgattatcggggaaaaaatccgtgtgcatattctggct
aagcagctaggcgttgcatctaaagagctcatcgcgcagttggcaaccatgggactgaaa
aaagtagcgcagtcgacgttgaataaccaagaagctaatcagctgctcgactctttcgtt
ccggcgcaacaggaatcagatgagaagttgcgctaccgcgtggaaaagaacgtggaaaat
gagatcgcgcagatcgaagccaaggtcaaccgcgacctagaagaagcagcggcgaacgat
catggtgtagcggattctgaagaagcgaagttgcgctaccgcgtggaaaaaaacgtggat
aacgaggtcgagcagattaagcagcaggtcgagcgcgaactaagtcagcgctcggcggag
atcgaggacttccacgaggttatcgagctcgaaaaagaagcggagccgctcgaggacgtt
gagccggaatctgcacctgcgccagcgagcgtgtcctacagcgttccgctgtttatcgcc
cccacggtcgttgatgtcgttgatgatgagatcgaagaagcagaagacgacgaggatggg
gaagacgatactgacgacgactccactcacgctaagcgtcgtcgtcgtggtcggcgtggg
accggtcggggcaagggtgtagatgattcagctgagattgttgaagcagaagatgttgac
gagcacgaagccgaagaaatcaccgagccagtaggtattaaaggctcaactcgtttggaa
gcacagcgtcgtcgccgcgcggagctgcgtgaagagtcgaaaaagaagcgccacatcgtt
tctgaggccgagttcctagcacgtcgtgaatctgtcacgcgcacgatggtggtacgtgag
cgcgatcgcgtagaccaccatggcatggtgactcaggtgggcgtgctcgaagacggcatg
cttgttgagcactttgttaccagcgaggcccaggcctcgatgatcggcaacatctatctt
ggtcgcgtgcaaaacgtcctacccagcatggaagctgccttcattgacatcggaaaaggt
cgcaacggtgtgctttacgcgggcgaggtggactggcgtgccgcaggccttggtgggcga
ggccgtcgtatcgagcaagccctgaaatccggcgaccaggtccttgtccaggttgctaaa
gatcctattggacacaagggtgctcgccttaccacccagatttcctttgcgggacgctac
ttggtctacgtgccaggtggacgcaccgcagggatttcccgcaagctcccagctcctgag
cgtaagcgtttgaaggaaatcctcaaggaggtcgtgcctcacgacggcggtgccatcatc
cgaactgccgccgaaaacgtttctgcagaagcaatcggtgcagacgttaaccgcttgcac
aagctctgggacaagatccagcagcgcaccgaagaagaaaaagcttctaagggcgccaag
ccggtgaccatgtacgaagagcccaacatgctcgtcaaagtggtgcgtgatctcttcaat
gaagacttcacctccttggttatcgatggtgaccgcgcatggaacacggttcacgcgtat
gtgcagtcggttgccccagacttgctggaccgcttggtgcgctttgaccgcagcgagcat
gagggacgcgacgccttcgaggtgcaccgtgttaacgagcagatcaagaaggctctatcg
cgaaaggtatggctgccatctggtggcaccttggtgattgaccgcaccgaagcgatgacg
gtgatcgacgtgaacactggcaagttcactggtgcaggcggaaacctcgaagagaccgtg
accaagaacaaccttgaggccgcagaagagatcgttcgtcagatgcgtctgcgcgatctc
ggcggcatgattgtggttgatttcatcgacatggttttgccggaaaaccaggacttggtg
ctgcgtcgccttaccgaggcattagggcgcgaccgtacccggcatcaggtatccgaggtg
acgtcgttaggcctcgttcagatgacccgcaagcgcttgggtactgggcttttggaaacg
tttgctaccgaatgcccgcactgtgaaggccgcggcgtgatcatccacgacgatcccgtc
gagcagcgggatgccgatgtggcaatggaaaagtcccatcgtgctcgcaatgatcgcaag
aagaacaagaaccacaccccatccgagcatctggcagcagctgccatgcatgaggaaaag
aagaaggtcagtatcgaagacctcgtcgccgccgtggttattgaggacgatccacagccg
gagcctgacgtagtacccacacctgccgatgtcgacgtgatggacatcgttagcgctgcg
ttggatcgtgcttatgaggaagatcctgacgagccttctggatctgactatctgccgcta
gaagaaaagccgcagacctatgccgaagcattgaaagagtttgagcgctctccacgccgt
aagcgtaagactcgtggcaattccgtctccgacgtgccgccgcgcaaggcagattttgaa
aaatcggaaccgcaaccggaaccacaaccgcaaccacagccagaacctgaggctgtcgtg
gagaaaataagctcgcgtggtcgccgtcgcgctgtgcgacgcacggtagtggaggctgcc
cccgaggtggtagcgccaacggaaactgttgaatcctcccgtggtcgccgtcgcgctgtt
cgtaagaaaatggctgctcagtcagtgcaagcggagcctgtagtggaagacaagcgtgag
gtttccgcgccatctcagggtggtcgggggcgtcgccgtgcttcacgacgcgcaacacgc
cgttaa
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