Magallana gigas (Pacific oyster): 105317109
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Entry
105317109 CDS
T03920
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105317109
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
crg04990
]
105317109
Domain-containing proteins not elsewhere classified [BR:
crg04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
105317109
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_CCN
TSP1_spondin
PLAC
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
105317109
NCBI-ProteinID:
XP_065943947
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Position
6:complement(15130282..15169870)
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AA seq
865 aa
AA seq
DB search
MAGSSLSARTLSKLVILLTVILQLSTAQRTWTEWSPCTATCGPGVRHRYLQCLPSAQNCY
GNQKQYKVCNVEDCKGKGNDYRSTECRKYNSKKHRGRFFQWEKYILPSRQCALTCRAVYY
GLHQTFRGEVRDGTFCDDTSTDKVCIQGRCITVGCDGIVGSGAVVDRCGVCNGNNRDCQT
ISGIYTRASLPYGYNLITRIPVGACNINITELGASRNYLAFRLQNGSYVMNGNNRLSRAG
DYEAAGTTFTYRKREGAGCPGECVRAKGPVNQTVDVQLLYYRTSPGILYQFTIPKHMTKA
AMEAIIPRLKVGNQFNPAVDQPLADGSMQSAYETGYENIPTGEGSYPFPKDYRPRIIPNR
RTSVQSPPQYIPYSGVKPELQSLTLSGRGQSRNLTESQQRQYSAYYGPFKPNQAVSGDYG
RRYATLSSDTARNNAINQGYPVQNNNVINNRPPVLAARNIPDASRYDWRIVGFTECSLTC
GRGVQQTKIVCLERDRNLIVTDDNCVPTTRPAVQTIQCNIRICPPGWDIGNWSDCSVSCG
RGMQTRPVVCAQRVSSTSRIDVQPSKCPSPRPESSRTCMNKPCAEWKVGDWQKCSSVCGK
GERSRLVVCHSVDDRNVTDDQCEGLKPLDIQICDMGSCAQGWFHSPWSRKCFPSCGRGHR
SRQVYCSSPDGSQISEAKCQSKKPKQKKACRNKRPCGGYWFAGPWSECSSTCGSGVQERS
VICVKKLDKKLFTIVGKENCRGRDKPEMERPCEQLPPCQPQWFMTPWTQCSASCGTGTKT
REVRCMDPELAPSSTCTANKKPSQQNICNTQPCTDESVQQDPSCKDVYKFCRLAGPARLC
SYPFYQENCCSSCQTYQHRKTKEKP
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtcatctcttagtgccaggactctcagtaaactggtgatcttgttaacagtc
atacttcagctttcgactgctcagagaacatggaccgagtggtcgccatgcaccgctacc
tgtggaccgggggttcgacatcggtacttgcaatgcttaccaagtgctcaaaattgctat
ggaaatcaaaagcagtataaagtttgtaatgttgaggactgtaagggtaaaggcaatgac
taccgatcaacagagtgtcggaagtataactcaaagaagcacagagggagattcttccag
tgggaaaaatatattctcccctcccgtcagtgtgcattaacatgtagagcagtttactat
ggactccaccaaacatttcgtggagaagttcgggatgggacattttgtgacgacacatca
actgataaagtctgcattcaaggaagatgcattacagtgggctgtgatgggattgtggga
tctggagcagtggttgatcgctgtggagtctgcaacgggaacaatcgggattgccagaca
atatctgggatctacactcgagcctctctaccttatggatacaacctcatcactcgcatt
ccagttggagcctgcaatatcaatataacagagctaggagccagcagaaactacctagcc
ttccgtcttcagaatggaagttacgtaatgaatggcaataatcgcctcagcagagcgggt
gattacgaggcagcggggactacctttacctacaggaagcgggagggagcggggtgtcca
ggggagtgtgtcagggccaagggtccggtcaatcagacggtagatgtacagttgctgtat
taccgaacaagccctggcatcttgtatcagtttacaattcctaaacacatgaccaaagca
gcgatggaggcaatcattccaagactgaaggtggggaaccaatttaaccctgcggtggac
cagcctttggcagacggcagcatgcaatccgcctacgagactgggtacgaaaatattcct
actggagagggaagttaccccttccctaaggactacagacctaggatcattccaaacagg
aggacttcagtgcagtcccctccccagtacattccatattcaggggtcaaacctgaactc
cagagtttgactttaagtgggcgtggtcaatcaaggaatcttaccgaatcccaacaaaga
cagtactccgcgtactacggaccattcaagcccaaccaggcagtgtccggagattacggt
agaagatatgcgacgctttcatccgatactgctcgtaacaatgcgatcaatcagggctac
cctgtacagaataacaatgtgatcaataatcggcctcctgttcttgctgctagaaacatc
ccagatgcgtcccgatatgattggagaattgtgggatttacggaatgttctcttacttgt
ggaagaggcgtacaacagactaagattgtgtgtttggagagagacaggaatctgattgtg
acggacgacaactgtgttcccacgacgcgacccgcagtacagacgatccagtgtaacatc
agaatatgtccgcctgggtgggacatcggaaattggtcggattgcagcgtgtcttgtgga
cgtggcatgcagacacgcccagtggtctgtgctcagagagtctcgtcgacttccaggatc
gacgttcagcccagcaaatgccctagccctcgacctgagtcctcgcgcacttgcatgaat
aaaccatgtgcagagtggaaggttggagattggcaaaagtgctccagtgtgtgtggtaaa
ggagagagaagtcggttggtggtctgccacagtgtggatgacaggaatgtaacagatgac
cagtgtgagggcctcaagccgctggatatccagatctgtgacatgggatcttgtgctcag
ggctggttccacagcccatggtcaaggaagtgctttccttcctgtggaagaggacatcgc
agtagacaagtgtactgctcatctcccgacggatctcagatatcggaggccaagtgccag
tccaagaaaccgaagcagaagaaagcctgtcggaacaagcgaccctgtggaggctactgg
tttgctgggccctggtcagagtgttcatcaacctgtgggtctggggttcaggagaggagt
gttatatgtgtgaagaagctagacaagaagttgtttaccattgtgggtaaggagaactgt
agagggagggataagccagagatggagagaccctgcgaacagctgccaccatgtcaacct
cagtggttcatgacgccatggactcagtgttctgcaagttgtgggacaggcaccaagacg
cgagaggtacgctgtatggacccagaactagcccccagctctacctgcaccgcaaacaaa
aaacctagtcaacaaaacatctgtaacactcagccctgcacggatgagagtgtacaacaa
gatcccagctgtaaagatgtgtacaagttctgtagattggcagggccagcccggctatgt
tcatacccattctatcaagaaaactgctgctcctcatgccagacatatcaacatagaaaa
accaaagaaaagccataa
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