Magallana gigas (Pacific oyster): 105317164
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Entry
105317164 CDS
T03920
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crg01002
]
105317164
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
crg00536
]
105317164
Peptidases and inhibitors [BR:
crg01002
]
Cysteine peptidases
Family C46: hedgehog family
105317164
Glycosaminoglycan binding proteins [BR:
crg00536
]
Heparan sulfate / Heparin
Morphogens
105317164
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Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Motif
Other DBs
NCBI-GeneID:
105317164
NCBI-ProteinID:
XP_065941950
UniProt:
A0A482CVZ8
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Position
5:complement(46167548..46219695)
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AA seq
407 aa
AA seq
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MRSQALLSALQAAVLAFLILTGPSLQCASPRGSGRRHRTGNRTPLVYKQHVPNVSENTLG
ASGLAEGRISKEDPRFKKLVTNDNPDIIFRDEEGDGTDRIMTQRCKDKLKILAISVMNTW
QGVKLRVTEAWDDDGHHAKDSLHYEGRAVDITTSDKDRAKYGMLAKLAVEAGFDWVYFES
RGHIHCSVKSDSSAAIKIGGCFPPLATVYAENKGTLNMADLRIGDKVLSLKADGKLGFSE
VVSFLDRNDKRSGVYYSISTSDLRTITLTDNHLIYTSTTNSSSIESYVANYAQTVQVGQF
VLVNDNNSEIRASQVTHVTSQTVTGVYAPLTNDGTIVVNGVVTSCYGIINSERIAHLSCS
PLRWMHTLSKYIPFISRDTEQNGIHWYAEFLYSVGRIFLSPDLLYIV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcacaggcgcttctctccgcgcttcaagcagcagtgttagcgtttctcatactg
actggaccgtcgttacagtgcgcgtcaccccgggggtcggggcggaggcacaggaccggc
aataggacacccctagtgtacaaacaacacgtgccgaacgtctcagagaacaccctgggc
gccagcggcctagcggaggggcgaatcagtaaggaggatcccaggttcaaaaaactagtg
acaaacgataacccagacatcatattcagagatgaagagggggatggaacggacagaatc
atgacacagagatgcaaggacaaattgaagatccttgccatatccgttatgaacacgtgg
cagggggtgaagctgagagtgaccgaggcctgggatgatgacggtcaccacgccaaggac
tcgctccactacgaaggtcgggccgtggacatcaccaccagcgacaaggaccgcgccaaa
tacggcatgctggccaagctggcggtggaggcaggattcgactgggtgtactttgagtcc
agggggcacatccattgttctgttaaatcagactcatcagctgccatcaaaatcggaggt
tgtttcccgccattggctacagtgtacgcggagaacaaaggaacgttaaatatggcggat
cttcgaattggagacaaggttctcagcttgaaagccgacggaaaacttggttttagcgag
gtagtctccttcctcgacagaaatgataaacgaagcggagtttactattccatttcaaca
agtgacctacgaaccataactcttactgataaccatctcatatatacttctactacgaat
tcatcctcaatcgaatcttatgttgcaaattacgcacaaacagttcaagttggtcaattt
gttttagttaacgacaataacagtgaaatcagagcgtcacaagtgactcatgtgacgtca
caaacagtgactggtgtatatgcaccgctgacaaatgatgggaccatcgtcgtaaatgga
gttgtgacttcatgttatggcatcattaacagtgaacgcattgcacatttatcctgtagc
ccgctccgatggatgcacactttatcaaaatacattcctttcatatcacgtgatacggaa
caaaatggcatccactggtatgccgaattcctttactcagttggaagaatcttccttagt
ccggatttgctatacattgtttga
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