Magallana gigas (Pacific oyster): 105317804
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Entry
105317804 CDS
T03920
Name
(RefSeq) protein PAXX
KO
K25772
protein PAXX
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crg03400
]
105317804
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
105317804
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GFIT
Motif
Pfam:
PAXX
XRCC4
RA
Spc24
TcpS
DUF5818
Motif
Other DBs
NCBI-GeneID:
105317804
NCBI-ProteinID:
XP_011412836
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Position
6:complement(11650471..11653048)
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AA seq
201 aa
AA seq
DB search
MSSFKDSILEAKVGNLHRLIENGRQKFLIFTKMGKSFSLNATDGIDVWRLDMDEKELESL
RELSETSSNEAFLLKIRKGFTDGDLSVALIGNRITLTIGKGPSALTFDLYECKAVEKRTE
LQDLLFRLASSSTKLEGELAAANKTIENLKSQTANASAGASAMDFGSKRESRAKPMPKKV
GMSVINPGSKKRKAATGIEFD
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttttaaggatagtattttagaagcaaaagttggtaatttacacagattgata
gaaaatggacgtcaaaagtttcttatctttaccaaaatgggaaagagtttttccctaaac
gccacggatggtattgatgtttggcgactggatatggacgaaaaagagttagagtcgcta
agagagttgtctgaaacgtcatcaaatgaggcttttcttcttaaaattaggaagggattt
acagatggagatctttctgtggcattaataggaaatagaataactttaacgattggcaaa
ggtccaagtgcattgacctttgacttatatgagtgcaaagctgttgagaagagaacagaa
ctgcaggatttattgtttcgattggcctcatcatctacaaaacttgaaggtgaacttgca
gcagctaacaaaacaatagagaacttgaaatctcagacagcaaatgctagtgctggagct
tcagccatggattttggttcaaaacgggagtctcgtgcaaaacccatgccaaagaaagta
ggcatgagtgtgatcaatcctggcagcaaaaagaggaaggctgcaacaggaatcgagttt
gactga
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