Crassostrea gigas (Pacific oyster): 105317836
Help
Entry
105317836 CDS
T03920
Name
(RefSeq) protein jagged-1b
KO
K06052
jagged-1
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105317836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
crg04090
]
105317836
CD molecules [BR:
crg04090
]
Proteins
105317836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
DSL
DL-JAG_EGF-like
EGF_2
EGF_CA
JAG1-like_EGF2
EGF_3
DUF6377
Orf78
Motif
Other DBs
NCBI-GeneID:
105317836
NCBI-ProteinID:
XP_034324077
LinkDB
All DBs
Position
LG3:46462626..46499059
Genome browser
AA seq
1235 aa
AA seq
DB search
MLVLCLSVLLMTVLEYTSGSGYFEIQITAIQNPRGEVLNGTCCDGLRNLNGSCSDECDTF
FRVCLKEYQSRVTFDGSCTFGNKTSPILGGNTFTYPPDYNRTRLKLPFDFAWTRSYTLIL
EAWDQDTMAYGGQLIERAAHSGIILPGQDWHTITHNGPTASLIYRIRVVCDDHYYNTTCT
KFCRPRNDHFGHYTCDRNGDKVCMQGWMGNNCEKAICKTGCSHGSCDSPGECRCSYGWQG
ALCDQCIPYPGCKHGSCNGSPWSCDCDMNWGGILCDKDLNYCGRHHPCLNGGICKNTAPD
SYECTCYEGFSGVNCEIAEHACSTKPCKNGASCIDTMGGFICTCAPGWTGAFCEGYVNEC
ASDPCLHGGTCVDGINSYRCLCPPGWGGAHCQLDSDECSGSPCVNAHSCQDLQGGYKCHC
QTGWTGKNCDININDCHHQCQNGGHCVDLVNSYHCACMPGYTGRHCETEICECCSSPCQN
GATCHEQVAGYTCECQVGYTGFNCQVDVDPCHPNPCLNGASCFNVQGDYYCHCSDHWEGR
HCENTKSTCMSGSCQVIDSCTIALQSNHTETGGVQLISSNVCGKHGMCISKPDGGFTCAC
DLGFTGAYCQENVNDCKENPCLNGGTCIDGINNYQCICKEGWEGVHCNINRNECSPNPCR
NGGFCIDLVADFVCECVNHWKGKTCTLRDSQCDRDTCKNGGTCSDLGDTFTCNCPKKFEG
STCQLSSVKACDSSPCHNGGTCVNSGDSFTCICKDGYEGPLCEADINNCNPFPCYNGGRC
IDGINWYRCQCAKGFAGPDCRIFNECASSPCTFGSTCIDGIGEYKCICPPGRTGRKCEEV
VGQIPSPLSCEFNRRIYSDQTTWEHECNSCTCTNGVIKCSKIWCGPKNCISHQNITESLE
VCSPKQSCVVETEHNCFVPPCLPWGQCKDIDKVNDPLPHSINTNCVPNAAELGNNCAKIT
LIFELKKMPVGITVEFICDTLRQFPVLQDLSHDQDIYILCEVQSGHPDTLEVLISSESTS
VKTDELDPELKSAVHKLTSIISHKKSNSSALSAVIEVTVETIVTNSAQKSEAGLLIPVIC
SVIGVVGLLVIIVLFVCHFRRKKEIARRRAEAQYVEQKTNNENEENLRRYKNPLYAGTDK
GGGTRKVSASEFHEVDLDKFENLEKSPTRLLSGRSDSPNDSNDWNNSSPPTKTVKKDINI
ELSRSRARVRAAERELIEISRTIAADLRSENEVMV
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgttgtgtttgagtgttcttcttatgacagttttggaatacacatctggatct
ggctattttgaaatccaaattaccgcaatccagaaccccaggggtgaggtattgaatggt
acctgttgcgatgggctgcggaatttgaacggctcttgcagtgatgagtgtgatactttt
ttccgggtttgtttgaaggagtatcaaagtcgggtaacctttgatggttcctgtactttt
ggaaacaagaccagtcccattttgggaggaaacacttttacctacccccctgattacaac
cggaccagattaaaattaccttttgactttgcttggacgaggtcctatacccttattctg
gaagcctgggaccaagatacaatggcttatggtggtcaattgatcgagcgggctgcccac
tctggcatcattctgcccggtcaggactggcacaccatcacccacaacggtccaacagcc
agcctcatatacagaatccgcgtggtgtgtgatgaccattactacaacacaacctgcacc
aaattctgtcgccctcggaatgaccactttggacattacacctgtgatagaaatggagac
aaggtctgcatgcaaggttggatgggaaacaactgtgaaaaagccatatgcaagactggg
tgcagccacgggtcatgtgattctccaggggagtgcaggtgctcttatggatggcaaggt
gctctgtgtgaccagtgtatcccctacccaggctgtaagcatggatcctgtaacggctca
ccctggagctgtgactgtgacatgaactggggaggaattctgtgtgacaaagatctgaat
tattgtggccgacatcatccatgtttgaatggtgggatctgtaagaacacagctcctgac
agttatgaatgcacctgctatgaaggtttctctggtgttaactgtgaaattgctgagcat
gcatgttccaccaagccatgtaagaacggagctagctgtattgacacgatgggtgggttc
atctgtacgtgtgccccgggctggactggggcattctgtgagggatacgtcaatgagtgt
gcatcagatccgtgtctccatgggggcacatgcgtggacggcatcaacagctataggtgc
ctgtgtcccccaggctggggcggggctcactgtcagctggactcggacgagtgcagcggt
agtccctgtgtgaatgcccactcctgccaggatcttcagggaggatacaagtgtcactgt
cagactggatggacagggaagaactgcgacatcaacataaacgattgccatcatcaatgt
caaaacggaggacactgtgtggacttggtgaattcctaccattgtgcctgcatgccgggt
tatactggtcggcactgcgagacagaaatctgtgaatgctgcagctccccttgtcagaat
ggggccacatgtcacgaacaggtagcaggctacacctgtgaatgccaggttggctatacc
ggattcaactgccaggttgatgttgacccatgtcaccccaacccttgcctgaatggagcc
agttgtttcaatgtacaaggcgactactactgtcactgctctgaccactgggagggacga
cattgtgagaacacaaagtcaacctgtatgtcagggtcatgtcaagtgatagacagttgc
accatcgccctgcagtctaatcacacggagacgggcggggtacagctcatctcctccaat
gtgtgtgggaaacatggcatgtgcattagtaaacctgatgggggtttcacttgtgcatgt
gatctcggtttcactggggcatattgccaagagaatgtcaatgactgtaaagagaacccc
tgtcttaatggtggcacctgcattgatggcatcaacaactaccagtgtatctgcaaggag
ggatgggaaggagtccactgtaacataaataggaacgagtgttcaccaaatccttgtcgt
aacggtggcttctgcattgacctggtggccgactttgtctgtgaatgtgttaatcactgg
aagggcaagacttgcaccctcagagattcccaatgtgaccgagacacttgtaagaatggg
ggcacctgcagtgaccttggggacactttcacctgtaactgtccaaagaaatttgaaggc
agcacttgtcagctttcctcagtgaaagcctgcgattcctccccctgtcacaatggaggg
acttgtgtgaacagtggtgatagctttacatgtatttgtaaggatggttatgaaggacca
ctgtgtgaagctgatatcaacaactgtaatccttttccatgttacaatggtggtcgctgc
attgatggcatcaactggtataggtgtcagtgtgcaaaaggctttgctggaccagactgt
cgaatattcaatgagtgtgcctcttcgccatgtacttttggaagcacctgtattgatggt
ataggcgagtacaaatgtatctgcccacctggtcgtacagggaggaaatgtgaggaggtg
gtagggcagatcccctccccactctcctgtgagttcaaccgaagaatctactcagatcaa
accacttgggaacatgaatgcaattcctgcacttgtacaaatggtgtcattaaatgcagt
aaaatttggtgtggacctaaaaactgcatctcgcatcagaacataacagagtcattagaa
gtctgtagtcctaagcagtcctgtgtggtagagacagagcacaactgctttgtccctcct
tgtctcccctggggtcagtgcaaggacatagacaaggtcaatgaccctctcccccacagc
atcaacacaaactgtgttcccaatgcagcagaacttggcaacaactgtgccaaaatcact
ctaatctttgaactcaagaaaatgcctgtgggcattaccgtggaatttatctgcgacact
ctccgacagtttcctgtcctacaagacttgtcacatgatcaagatatctacattctatgt
gaagtccagtctggtcatccagacactttagaagtgctaatatcatccgaaagcacttca
gttaaaactgatgaactggacccagagttgaagtctgcggtccacaagctgaccagtatt
atcagccacaaaaagtccaacagcagtgccctgtctgctgtaattgaggtcaccgtggag
accattgtcaccaactctgcccaaaagtcagaggcagggctgcttattccagtcatctgt
tctgtgattggagtagtaggacttctagttataattgtgctatttgtgtgtcattttcgt
cgtaagaaagaaatcgcaaggaggcgagcagaggcacaatatgttgaacaaaaaacaaac
aatgaaaatgaagagaatcttagacgatacaaaaatccattgtatgctggaactgataaa
ggcggagggacgaggaaagtgtctgcatctgagtttcatgaagtggatttagataaattt
gaaaacttagaaaagagtccgacaaggttactcagtgggcgatcagattcgccgaacgat
tccaatgattggaataattctagtcctccaacaaaaactgtcaaaaaagacatcaatatt
gaattatcacgatccagagctcgcgtaagggccgcggaaagagagctcatagaaatctct
cggactattgctgctgacttacggtctgaaaatgaggtcatggtgtga
DBGET
integrated database retrieval system
