Magallana gigas (Pacific oyster): 105317836
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Entry
105317836 CDS
T03920
Name
(RefSeq) protein jagged-1b
KO
K06052
jagged-1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105317836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
crg04090
]
105317836
CD molecules [BR:
crg04090
]
Proteins
105317836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
DSL
EGF_DL_JAG
EGF_2
JAG1
EGF_CA
JAG1-like_EGF2
EGF_3
EGF_Teneurin
DUF6377
Orf78
Motif
Other DBs
NCBI-GeneID:
105317836
NCBI-ProteinID:
XP_065943156
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All DBs
Position
6:complement(11566173..11602014)
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AA seq
1236 aa
AA seq
DB search
MLVLCLSVLLMTVLEYTSGSGYFEIQITAIQNPRGEVLNGTCCDGLRNLNGSCSDECDTF
FRVCLKEYQSRVTFDGSCTFGNKTSPILGGNTFTYPPDYNRTRLKLPFDFAWTRSYTLIL
EAWDQDTMAYGGQLIERAAHSGIILPGQDWHTITHNGPTASLIYRIRVVCDDHYYNTTCT
KFCRPRNDHFGHYTCDRNGDKVCMQGWMGNNCEKAICKTGCSHGSCDSPGECRCSYGWQG
ALCDQCIPYPGCKHGSCNGSPWSCDCDMNWGGILCDKDLNYCGRHHPCLNGGICKNTAPD
SYECTCYEGFSGVNCEIAEHACSTKPCKNGASCIDTMGGFICTCAPGWTGAFCEGYVNEC
ASDPCLHGGTCVDGINSYRCLCPPGWGGAHCQLDSDECSGSPCVNAHSCQDLQGGYKCHC
QTGWTGKNCDININDCHHQCQNGGHCVDLVNSYHCACMPGYTGRHCETEICECCSSPCQN
GATCHEQVAGYTCECQVGYTGFNCQVDVDPCHPNPCLNGASCFNVQGDYYCHCSDHWEGR
HCENTKSTCMSGSCQVIDSCTIALQSNHTETGGVQLISSNVCGKHGMCISKPDGGFTCAC
DLGFTGAYCQENVNDCKENPCLNGGTCIDGINNYQCICKEGWEGVHCNINRNECSPNPCR
NSGFCIDLVADFVCECVNHWKGKTCTLRDSQCDRDTCKNGGTCSDLGDTFTCNCPKKFEG
STCQLSSVKACDSSPCHNGGTCVNSGDSFTCICKDGYEGPLCEADINNCNPFPCYNGGRC
IDGINWYRCECAKGFAGPDCRVNINECASSPCTFGSTCIDGIGEYKCICPPGRTGRKCEE
VVGQIPSPLSCEFNRRIYSDQTTWEHECNSCTCTNGVIKCSKIWCGPKNCISHQNITESL
EVCSPKQSCVVETEHNCFVPPCLPWGQCKDIDKVNDPLPHSINTNCVPNAAELGNNCAKI
TLIFELKKMPVGITVEFICDTLRQFPVLQDLSHDQDIYILCEVQSGHPDTLEVLISSEST
SVKTDELDPELKSAVHKLTSIISHKKSNSSALSAVIEVTVETIVTNSAQKSEAGLLIPVI
CSVIGVVGLLVIIVLFVCHFRRKKEIARRRAEAQYVEQKTNNENEENLRRYKNPLYAGTD
KGGGTRKVSASEFHEVDLDKFENLEKSPTRLLSGRSDSPNDSNDWNNSSPPTKTVKKDIN
IELSRSRARVRAAERELIEISRTIAADLRSENEVMV
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgttgtgtttgagtgttcttcttatgacagttttggaatacacatctggatct
ggctattttgaaatccaaattaccgcaatccagaaccccaggggtgaggtattgaatggt
acctgttgcgatgggctgcggaatttgaacggctcttgcagtgatgagtgtgatactttt
ttccgggtttgtttgaaggagtatcaaagtcgggtaacctttgatggttcctgtactttt
ggaaacaagaccagtcccattctgggaggaaacacttttacctacccccctgattacaac
cggaccagattaaaattaccttttgactttgcttggacgaggtcctatacccttattctg
gaagcctgggaccaagatacaatggcttatggtggtcaattgatcgagcgggctgcccac
tctggcatcattctgcccggtcaggactggcacaccatcacccacaacggtccaacagcc
agcctcatatacagaatccgcgtggtgtgtgatgaccattactacaacacaacctgcacc
aaattctgtcgccctcggaatgaccactttggacattacacctgtgatagaaatggagac
aaggtctgcatgcaaggttggatgggaaacaactgtgaaaaagccatatgcaagactggg
tgcagccacgggtcatgtgattctccaggggagtgcaggtgctcttatggatggcaaggt
gctctgtgtgaccagtgtatcccctacccaggctgtaagcatggatcctgtaacggctca
ccctggagctgtgactgtgacatgaactggggaggaattctgtgtgacaaagatctgaat
tattgtggccgacatcatccatgtttgaatggtgggatctgtaagaacacagctcctgac
agttatgaatgcacctgctatgaaggtttctctggtgttaactgtgaaattgctgagcat
gcatgttccaccaagccatgtaagaatggtgctagctgtattgacacgatgggtgggttc
atctgtacgtgtgccccgggctggactggggcattctgtgagggatacgtcaatgagtgt
gcatcagatccgtgtctccatgggggcacatgcgtggacggcatcaacagctataggtgc
ctgtgtcccccaggctggggcggggctcactgtcagctggactcggacgagtgcagcggt
agtccctgtgtgaatgcccactcctgccaggatcttcagggaggatacaagtgtcactgt
cagactggatggacagggaagaactgcgacatcaacataaacgattgccatcatcaatgt
caaaacggaggacactgtgtggacttggtgaattcctaccattgtgcctgcatgccgggt
tatactggtcggcactgcgagacagaaatctgtgaatgctgtagctccccttgtcagaat
ggggccacatgtcacgaacaggtagcaggctacacctgtgaatgccaggttggctatacc
ggattcaactgccaggttgatgttgacccatgtcaccccaacccttgcctgaatggagcc
agttgtttcaatgtacaaggcgactactactgtcactgctctgaccactgggagggacga
cattgtgagaacacaaagtcaacctgtatgtcagggtcatgtcaagtgatagacagttgc
accatcgccctgcagtctaatcacacagagacgggcggggtacagctcatctcctccaat
gtgtgtgggaaacatggcatgtgcattagtaaacctgacgggggtttcacttgtgcatgt
gatctcggtttcactggggcatattgccaagagaatgtgaatgactgtaaagagaacccc
tgtctgaatggtggcacctgcatcgatggcatcaacaactaccagtgtatctgcaaggag
ggatgggaaggagtccactgtaacataaataggaacgagtgttcaccaaatccttgtcgt
aacagtggcttctgcattgatctggtggccgactttgtctgtgaatgtgtcaatcactgg
aagggcaagacatgcaccctcagagattctcaatgtgaccgagacacttgtaagaatggg
ggcacctgcagtgaccttggggacactttcacctgtaactgtccaaagaaatttgaaggc
agcacttgtcagctttcctcagtgaaagcctgcgattcctccccctgtcacaatggaggg
acatgtgtgaacagtggtgatagctttacatgtatttgtaaggatggttatgaaggacca
ctgtgtgaagctgatatcaacaactgtaatccttttccatgttacaatggtggtcgctgc
attgatggcatcaactggtataggtgtgagtgtgcaaaaggctttgctggaccagactgt
cgagtcaatatcaatgagtgtgcctcctcgccatgtacttttggaagcacctgtattgat
ggtataggcgagtacaaatgtatttgcccacctggtcgtacagggagaaaatgtgaggag
gtggtagggcagatcccctccccactctcctgtgagttcaaccgaagaatctactcagat
caaaccacttgggaacatgaatgcaattcctgcacttgtacaaatggtgtcattaaatgc
agtaaaatttggtgtggacctaaaaactgcatctcgcatcagaacataacagagtcatta
gaagtctgtagtcctaagcagtcctgtgtggtggagacagagcacaactgctttgtccct
ccttgtctcccctggggtcagtgcaaggacattgacaaggtcaatgaccctctcccccac
agcatcaacacaaactgtgttcccaatgcagcagaacttggcaacaactgtgccaaaatc
actctaatctttgaactcaagaaaatgcctgtgggcattaccgtggaatttatctgcgac
actctccgacagtttcctgtcctacaagacttgtcacatgatcaagatatctacattcta
tgtgaagtccagtctggtcatccagacactttagaagtgctaatatcatccgaaagcact
tcagtaaaaactgatgaactggacccagagttgaagtctgcggtccacaagctgaccagt
attatcagccacaaaaagtccaacagcagtgccctgtctgctgtaattgaggtcaccgtg
gagaccattgtcaccaactctgcccaaaagtcagaggcagggctgcttattccagtcatc
tgttctgtgattggagtagtaggacttctagttataattgtgctatttgtgtgtcatttt
cgtcgtaagaaagaaatcgcaaggaggcgagcagaggcacaatatgttgaacaaaaaaca
aacaatgaaaatgaagagaatcttagacgatacaaaaatccattgtatgctggaactgat
aaaggcggagggacgaggaaagtgtctgcatctgagtttcatgaagtggatttagataaa
tttgaaaacttagaaaagagtccgacaaggttactcagtgggcgatcagattcgccgaac
gattccaatgattggaataattctagtcctccaacaaaaactgtcaaaaaagacatcaat
attgaattatcacgatccagagctcgcgtaagggccgcggaaagagagctcatagaaatc
tctcggactattgctgctgacttacggtctgaaaatgaggtcatggtgtga
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