Magallana gigas (Pacific oyster): 105317862
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Entry
105317862 CDS
T03920
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crg03016
]
105317862
Transfer RNA biogenesis [BR:
crg03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
105317862
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT122_1st
WD40_Gbeta
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
105317862
NCBI-ProteinID:
XP_011412948
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Position
10:19262157..19277790
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AA seq
823 aa
AA seq
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MMCDVEPFYISCGCNRTPHCLDWASSGVICFAASHAVAIYYPEGYANGHGTISQTLIKHS
DRVNCVKWISNSNRQLCDERFISGSVDKTAIVWKKEKDGQYKAAAVLDFHSGPITIVNGL
ELTNQNVTYVVTGSTDSQIMIWMDLGTNEFSPLQSISFGSGFVLDISLVCLPSEEVPLLA
CGCDDHKVHIYALHDDFKIFQTFSKVISLQGHEDWVRAVDFCVEDGGDIMLASAGQDYLI
RIWRLSSRQAGIDDVIKSVKQLSIDEEIKMRENTFSFTHKEKKHMFAVRLESVLSGHENW
IYSIRWQLPVVMETSNHQPMRLLSASMDKTMITWMPDLDSGVWIEQMRVGEVGGNTLGLY
GGMFAPDGRSIIAHGYQGAFHQWSLDEGGKQWRPVVTGSGHFDEVEDLSWDTGGQFVLSV
SKDQTTRLHAPTTYKQGKEIWYEIARPQVHGYDLQCLAVINRYKFASGADEKVIRAFEAP
RNFIENFCSLCGKELKTELQKEEAQNRPEGASVPALGLSNKAVFTGERVPDDKELQPHPN
DQYPEVYFTPMTLTEPPTEEQLLQNTLWPETQKLYGHGYEIFSLACDPSGKVLASACKAA
KADFAGIILWDTVDWTQLCSLHSHTLTVTQMAFSHNGNFLLSVSRDRTWAVYRKKTADQP
ESDPLFSKLTGTDKKTAVHTRIIWSCAWSPNDEHFFTASRDKKIIVWQNPGLCEGGDCQP
VDSVTLPDSVTAIDVSSYLLTDNRHLLAAGLDNGRITLYTWKHTADKSSGWVLLAELDQR
QSHHLTVKRIRFSPQLRDKKIQEIASCSLDHCVKLYRTDITKL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgatgtagagccgttttatatcagctgtggctgtaacagaacccctcactgt
ctggattgggcgtcatcgggggtgatttgttttgcagccagtcatgctgtagcaatttat
tacccagagggatatgcaaatggacatggaaccatatcccaaacactgattaagcattct
gatcgagtgaattgtgtcaagtggatcagtaattcaaacaggcagctttgtgatgaacgg
tttatttcgggctctgtggacaaaactgcaattgtatggaaaaaggaaaaagatggtcag
tacaaagcagcagctgttcttgatttccactctggaccaatcacaatagtgaatggatta
gaattaaccaatcagaatgtgacatacgtcgttacaggctccacagactcccagattatg
atatggatggatttgggaactaatgagttctcccccttgcaaagcatcagttttggctct
ggttttgttcttgacatctctcttgtttgtctaccatctgaggaagtccctctcttggcc
tgtggatgtgatgaccacaaggttcatatatatgccttacacgatgatttcaagattttc
cagactttctccaaggtcatatctctacaaggtcatgaggactgggtgagagcggtggac
ttctgtgtggaagatggtggtgatatcatgttggcaagtgctggtcaggattacctcatc
agaatctggaggctgtcatcccgacaggctggaattgatgatgtcatcaaatctgttaaa
cagctgtctatagacgaagaaataaaaatgagagaaaacactttcagctttacacacaaa
gaaaaaaaacacatgtttgctgtgagattggaatcagttttaagtggacatgaaaactgg
atctatagtatacgatggcaactccctgtagtcatggaaacctccaatcatcagccaatg
agattgctgtcagcctcaatggacaaaacaatgattacctggatgccagatctggattct
ggagtatggattgaacaaatgcgggtcggagaggttggtggaaataccctgggattatac
ggaggaatgtttgctccggatggaaggtctatcattgcccatggttatcaaggcgcattc
catcagtggtccttggatgagggtggtaagcaatggcgaccggtggtgacaggaagtggc
cactttgatgaggtggaggatctgagctgggacaccggtggtcagtttgtgttgtctgtt
tctaaagaccaaaccacgcggttacatgctcccaccacatataaacaaggaaaggaaatt
tggtatgagattgcccggccacaggtccatggatatgacctacaatgtctagctgtcatc
aatcgctataagtttgcttcaggggctgatgaaaaagtcataagagcttttgaggccccc
cgaaattttattgagaatttttgttccctttgtggtaaagagctaaaaacagaacttcag
aaagaggaagctcagaatcggcccgagggcgctagtgtccctgctctgggactgtccaac
aaggcggtgtttactggggagagggttccagatgacaaggagctgcagccccaccccaat
gatcagtaccctgaggtctacttcactccaatgactctcacagagcccccaacagaagag
cagcttttacagaacactctgtggccagagacccagaagctgtacggtcatggatacgag
atcttctccttggcgtgtgatccaagtggaaaggttctggcctctgcctgcaaggcagct
aaagcagactttgcaggcatcatcttgtgggatactgttgactggacacagttatgttcc
ctgcatagccacacactcactgtcactcagatggcattttcacataatggtaacttcctg
ttgtctgtgtccagggacagaacgtgggctgtgtacaggaagaaaacagcagatcaacca
gagtcagatccccttttcagtaaattgacaggaacagacaagaaaacggcagtccacaca
agaatcatttggtcgtgtgcctggagtcctaatgatgaacatttcttcacagcatcaagg
gacaaaaagatcattgtgtggcagaaccctggtctgtgtgagggtggtgactgtcagccg
gtcgactccgtgacactccctgactcagttaccgccattgatgtctccagttacctcctg
actgacaacaggcacttgcttgcagctggtcttgacaatgggagaatcacactttatacc
tggaaacatactgctgataaatcaagtggatgggttctcttagcagagctagatcaaagg
caatctcaccatctaactgtgaagaggattcgcttctctccacaactaagagacaagaaa
atacaggaaattgctagctgcagtttggatcattgtgtcaaactatacaggacagatatc
actaaattatga
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