Magallana gigas (Pacific oyster): 105317892
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Entry
105317892 CDS
T03920
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105317892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105317892
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105317892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
WD40_CDC20-Fz
Clathrin
zf_RING_Vps8_fungal
Beta-prop_WDR5
WD40_Prp19
ANAPC4_WD40
WDR55
Beta-prop_WDR3_1st
Beta-prop_THOC3
zf-RING_11
zf-RING_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
PHD
Beta-prop_HPS5
WD40
Beta-prop_EML
EIF3I
zf-rbx1
Prok-RING_1
POU2F1_C
Beta-prop_WDR36-Utp21_2nd
Beta_prop_At2g24240
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
105317892
NCBI-ProteinID:
XP_065932226
LinkDB
All DBs
Position
2:complement(31609182..31628796)
Genome browser
AA seq
1377 aa
AA seq
DB search
MAEETTNSLLNFDIEFDDDEFKSDLPTVDNPTLESILNESEDYESPAEDDTSSVISAVQP
FKDSGDTTSLSSSDSNRTDRSSRSRQKKKIDIQKTIHGSVLKPNRLKNIAAQLLSAADRV
DAGMPTSMAISSLIAIGTSHGLVLVFDPKQVLKWCLGSTAVGQQYGSVSALSFNKDCTRL
LSGFAKGQITMWDLTNGKLLRTITDAHPPGSAVLHVKFTDSPVLAVCSDSGGSVFELEMK
RLIGVRTCESKCLFSGSRGEVCVVEPLHMNLTIKDHPMQDVMVVAMATLSKVLVVTLRPQ
LKVVFTHPLKGSPTCLPLLAWHFVVIQVSERDRVIDPVLVFARESTIYFFQVICNNAQDI
KCSGLQKITVPYKMLSVAWMNPRVLVTMDTNEKLHVIDVRSEEELEVLDVSSVQLVYNNS
HFKSLATGGNVSQALAMAGEEACYQTVVSQNGQLFLLGTKGVYVYTLRNWRERIDVLVKQ
NKYNEALALALSFYDGRAKAVIGLTASSKNKKEVVSSLMLDLLFEYVDLSMTTLCPEKGK
MEELEAYYQNIVPVCVDYCLHLSRTDILFGRIYDRFAVDYIARGTFLECLEPYILCDKLR
SIPPSVMKDLVEHYQAKNMLEGVESCIVHLEITSLDIHQVVNLCWSHGLYDAIIYVYNKG
MHDYTTPLEELLGILQQAVRTGIQLTDEQIRLGNKLLVYISCCLAGRAYPLGDIPEDMEA
DVKKNVFQCITRMKIKAEDPTYPYLRTLLQFDTREFLNVLALAFEEKEFNTEEGIRNRQR
VVDILLQVMVESGEFTPTQIGVLFTFLARQMASHENTILVNRVLFEQVLEFLANPEDDSR
HEERQQALMELLQAGGLQQVNEEKLLSMAENAKFFRVCELLYEKRRQFDKILSCYLRDPS
RKYHAFSYITSILNSERFSVEEQERLKEEAFNQLEELVSIDCKQAAQMVISTMPKNLGVI
ANKMKSNPKVLFEFLKGVMSCRDSGGSAIHTDKQVNIDPWIIELYVDLMCQFRPQEVYNY
IKLNEGYRLEQTLEICRRHKNSEATAYLLEKAGDIQGAFGIILTNLQNKLKALTNELLSP
ESEKDVTVQFLEVQALILVVIQLCQRNSGKMDEAGRESLWFPLLETVMSPQRKLKDLNNK
QIQEDFKKATHHVLNSMMGYIALPTILHKIMQDPAYSTGKFGEVRELILGMLETYNYEQT
LMETCKNLMNHDIHVHLKNLTTAAKKGYVPAGDNCSLCTKQFVNQNETDTVIIFRCGHSY
HKGCLQSIGSVHVIDGEDSWVCFLCSHRKRGQYQSTRFHRSHSNRGQPKGKDNTVDPQHS
QALDFVKSFLKTPSRMSLLSELSSSSAPKSHRGSSSIFNQENFQLKLAPPPAMESAP
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaactacaaacagtcttctaaattttgatattgagtttgatgatgatgaa
tttaaatctgacctgccaactgtagataatccaacccttgaaagcattttgaatgagagt
gaagactatgaatctccggccgaggatgacacatcctctgttatctctgctgtccagcca
tttaaggattcaggggacacaacctccctctctagctctgacagtaatcggactgacaga
agttccaggtccagacaaaagaagaaaattgatattcaaaagacaatacatggctcagtg
ttaaaaccaaatcgtctgaaaaacatagcagcccagcttctcagtgctgcagatagagtt
gatgcagggatgccaacatcaatggccatttcttccttaatagccattggaacatcgcat
ggactggttctggtttttgaccccaaacaagtgttgaagtggtgcttagggagcacagcg
gtgggtcagcagtacgggtctgtgtccgcgctcagcttcaacaaagactgcacccgactc
ctctcgggctttgccaaaggacagataacaatgtgggacttaaccaatggtaaacttctg
aggacaataacagatgcccaccccccgggctcagctgtccttcatgtcaagttcacagac
agtcccgtgttagctgtgtgtagtgacagtggagggtcggtgtttgaacttgaaatgaag
agattgattggagtgcgaacctgtgaatccaaatgtctgttctcaggaagccgaggagaa
gtttgtgtggtagagcccttacacatgaatctgactatcaaagatcatccaatgcaggat
gtaatggtggttgccatggcgacactgtcaaaagtgttggtggtaacattaagacctcaa
cttaaggttgttttcactcatccactaaaaggcagtcccacctgcctgcccctgcttgcg
tggcattttgtggtcatacaagtgtcagagagggaccgggtcattgacccagtgctggtg
tttgcccgggagtctaccatctacttcttccaggtgatatgtaacaatgcccaagatata
aagtgttccggtctccagaaaatcacagtcccgtacaaaatgttgagcgtagcttggatg
aatccccgagtccttgttaccatggataccaatgaaaaacttcatgttatagatgtcaga
tctgaagaagaacttgaggttttggatgtttcctctgtacagctggtgtacaataacagt
catttcaagtctctggctaccgggggaaatgtcagccaggcactggcaatggcgggagag
gaagcatgctaccagacagtggtcagtcaaaatggacagctcttcttgctggggaccaag
ggagtgtatgtttacacactccgcaactggagggagcgtatcgatgtactggtgaaacag
aacaagtacaatgaggccttggcactagctctgtccttctacgatggccgagccaaggca
gtgataggactgactgcctcctccaaaaacaagaaagaggtcgtctccagcttgatgtta
gacctcctgtttgagtatgtagatttgtccatgactacactgtgtccagagaaaggaaag
atggaggagttagaggcgtactatcagaacattgttccagtatgtgtcgactactgtcta
catctgagtagaacagacatcctgtttggaaggatctacgaccgtttcgcggtggactac
attgcccgggggacgttcctggagtgcctggagccttacatcctctgtgacaagttgcgc
tccatcccacccagtgtcatgaaggaccttgtggagcactaccaggccaagaacatgctg
gagggggtcgagtcctgtatagtccacctggagattaccagtcttgatatacaccaggta
gtaaacttgtgttggtcccatgggctgtatgatgccatcatctatgtctacaacaaaggc
atgcatgactataccactcctctagaggaactgctgggaattttacagcaggctgtccgg
acggggatacagctgacggatgaacagatccgacttggaaataaactcctagtctacatt
agctgctgcttggcaggaagagcctatccacttggtgacatcccagaagacatggaggca
gacgtcaagaaaaatgtcttccaatgcatcacacgcatgaagattaaagcagaggatccc
acttatccgtatcttcgaacactgctacagtttgacaccagagaattcctaaatgtgcta
gccttagcttttgaggagaaagaattcaacacagaagaaggaatcagaaaccgtcaaaga
gtagtggacattcttctgcaagtgatggtggaaagtggggaattcactcccactcagata
ggagttctgtttacgttcctggctcggcagatggcgagtcatgaaaacaccattctggtc
aacagagttttgtttgagcaggtgttggagtttttagctaaccctgaggatgattcccgc
catgaagagagacagcaggccctgatggagcttctacaggcagggggcctacaacaggtc
aatgaggaaaagttactgtccatggcagagaacgctaaattcttccgtgtctgtgaactg
ctgtatgagaagaggagacagtttgataaaattctgtcctgttacctcagagatccctcc
agaaagtaccatgcatttagttacatcaccagcatactgaacagtgagaggttttctgtg
gaagaacaggaaaggttgaaagaggaggcctttaatcagttagaggagctggtatccatt
gactgtaaacaggccgctcagatggtcatctctaccatgcccaaaaacctgggagtcatt
gccaacaagatgaaaagtaaccccaaggttttgtttgagttcctgaaaggtgtgatgtca
tgcagggattctggtggcagtgctatacacacagacaaacaggtgaacattgatccctgg
atcattgagctgtacgtggacctcatgtgtcagttcagaccacaggaagtctacaactac
atcaaactgaacgagggataccggctggagcaaactctggaaatctgtaggcgacacaag
aattctgaggccacagcgtacctactggagaaagcaggagacatccagggggcatttgga
atcattctgacgaacctccaaaacaaactgaaagcattgacaaatgaactactgtctcct
gagtcagagaaagatgtgacagtacagtttctggaggtccaggctctcatcctggttgtg
atccagttgtgtcagaggaattctgggaaaatggatgaggccggtagagagtccctttgg
ttccctctcctggagactgttatgtcaccacagagaaagctgaaggacctgaacaacaaa
caaattcaagaagattttaagaaagctacacaccatgttctgaacagcatgatgggatac
atcgctttacccacaattctacacaaaattatgcaggatccagcatatagtacagggaag
tttggagaagtaagggagttaatactgggcatgttggagacctacaattatgaacagact
ttaatggagacctgtaaaaacttgatgaatcacgatatccatgtccacctgaagaatctg
acgaccgcggccaagaaaggctacgtcccggcgggagacaactgctcgctgtgtaccaag
cagtttgtgaaccagaatgagaccgatacagtcattatattcagatgtggacacagttat
cataaaggatgcctacagtccatcggttcggtccatgtaattgatggcgaggactcttgg
gtctgctttctctgtagtcatcggaaacgcggccagtaccagagcaccagattccaccgt
agtcacagtaaccgcgggcaacccaaaggcaaagataatactgttgatccacaacacagt
caagccttggattttgtgaaaagctttttaaagactccttcaaggatgtctctcctgagt
gaactgtccagttcatcggcccccaagtcacaccgaggatcctccagcatcttcaaccaa
gaaaacttccagctcaaactggcgccccctccagcaatggagtcagcaccataa
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