Magallana gigas (Pacific oyster): 105318129
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Entry
105318129 CDS
T03920
Name
(RefSeq) RNA-binding protein 25
KO
K12822
RNA-binding protein 25
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105318129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105318129
Spliceosome [BR:
crg03041
]
Complex A
U1 snRNP components
U1 related factors
105318129
Complex B
105318129
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
105318129
NCBI-ProteinID:
XP_011413365
UniProt:
K1PZU2
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All DBs
Position
6:22649595..22660846
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AA seq
765 aa
AA seq
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MSFPPRPPIGMPPMGYAYAPVGMMPMGLGMMPQPVMRPIVTTQSAVSQPAKPFNRKLIPQ
EIPKDEKEEKPPVTTVFVGNISDRAPDAMIRQMLQRCGNVLSWKRVQGASGKLQAFGFCE
YEDPEATLRCMRLLNEWEIAEKKLVVKVDAKTKTLLDEYINKKKSRTSGVESEDKEKKEN
GDKEENETKVEEDLDEFTKREDRVAKAGLDAIMREYAEDLSKKMFMEVEKEPKPVKKKVE
EEKIIKDTGIDDIDLEDDKREIIHREIKSFRDLHKGEDEVEKDAEKEKERKDREREERMK
MVEERRRERERMKERERERELEKERYERERERIRSRTRSRSRSPRRWRERSRSREKERRK
ERDRDAEDEEEAYERRKLEKKLREKEAAYQERLKNWEARERKKAREYEKEREREEERKAE
ESREGRRLKEFLEDYDDERDDVKYYKGSCLNRRLKEREKEREADARDRQREKEELEEIKR
KLLDEGHPDPEAELMKIELEREEHLKPRLNISEENSPVQQKEPIRVDSSDEPEEEEEKPQ
LPPNMKSTLKPIDVSNSVTPMSEDNDSNFPPPDEDSQPVYGPSKEENAKLGFGGLKLGSS
SSPTESISSKRKKLTVGDVFNQDDEDSSSGSKKRKLVPLDYDDDKDGKKGATAEEKRLKI
KQLIESIPTAKDELFAYSLDWNIVDQVLMDKRIKPWVNKKIIEYIGEEEPTLTDFICQKV
MARSGPQAILNDVAMVLDEEAEVFVVKMWRLLVYETEAKKLGLVK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcctcctaggcctcccataggcatgcccccaatgggatatgcctatgcacct
gttggaatgatgcccatggggctgggcatgatgccccaaccggtcatgagaccaatagtg
acaactcaaagtgcagtctcacaaccagccaaaccattcaacagaaaattaattccacaa
gaaataccaaaggatgagaaggaagaaaaacctcctgtgaccacagtatttgttggaaac
atcagtgacagagccccagatgccatgatacgacagatgttacagagatgtggtaatgta
ctcagctggaaacgtgtgcaaggtgcctcagggaaattacaagctttcggattttgtgaa
tatgaagatccagaagcaactctgcgatgtatgagacttctaaatgaatgggaaatagca
gagaaaaaattagtggtaaaagttgatgccaaaacaaaaacacttttagatgaatacatc
aataaaaagaaatctagaactagtggcgttgaaagtgaagataaagaaaagaaagaaaat
ggagataaagaagagaatgagacaaaagttgaggaagacctggatgaattcacaaaacga
gaggaccgggtggcaaaggctggcctagacgccatcatgagagaatatgcagaggacctc
tcaaagaagatgttcatggaagttgaaaaagagccaaaaccagtcaaaaagaaagttgaa
gaagaaaagattatcaaagacacaggaattgatgacattgacttagaagatgacaaaagg
gaaataatccacagagaaatcaagagtttcagggatctccataaaggagaggatgaggtt
gaaaaagatgctgagaaggaaaaggaaaggaaagaccgggagagggaagaaagaatgaag
atggtggaagagagaagacgagagagggagagaatgaaggaaagagaaagggaaagggaa
ctggagaaggaacgctatgaaagagaaagggaacgcatcagaagtaggacaaggtcaaga
tctaggtcacccaggaggtggagagaaaggtcaaggtcacgagaaaaggagagaagaaag
gaacgtgatagagatgctgaagatgaagaggaggcttacgaaaggagaaaattggagaaa
aaattgagagagaaggaagcagcatatcaagagagattaaagaattgggaagccagagaa
agaaagaaggcaagggagtatgagaaagaacgagaaagggaagaggagaggaaagcagag
gagtcaagagaaggaagaaggctgaaggaatttctggaagattacgatgatgagagagat
gatgtcaaatactacaaaggcagctgtctaaatagacgactgaaagagagagaaaaggag
cgagaggctgatgctagggaccgacagagggagaaggaagaactggaagagatcaagagg
aagttactggatgagggacatccggacccagaggctgagctgatgaagattgaattagaa
agggaagaacacctgaaacctcgtctgaatatctccgaggagaattctcctgtccagcag
aaggagccgatcagagtagactcatcagatgaaccggaggaggaggaggagaagccacag
ttaccacccaacatgaaatccaccctgaagcctattgatgtgtccaacagcgtgaccccc
atgtctgaggacaacgacagcaacttccctcccccagatgaggactcccagcctgtgtat
ggtccaagcaaagaggaaaatgcaaaactaggctttggagggctgaagttgggaagctct
agcagtccgacagagagtatctctagcaagagaaagaagttgacagttggtgatgtattt
aaccaagacgatgaagatagttcatccggttctaagaaacgtaaactggtacctctggat
tatgatgatgacaaggacggcaagaaaggagccacagcagaggagaagaggctgaagatc
aaacagttgatcgagagcattcccacggccaaggatgagctgtttgcctactcgctggac
tggaacattgttgatcaggttcttatggacaagaggatcaagccatgggttaacaagaag
ataattgagtacattggtgaggaggagccaacccttacagattttatttgtcagaaagtg
atggcaaggagtggacctcaagcaatactcaacgatgtagctatggtgctagatgaagaa
gcagaggtgttcgttgtgaaaatgtggaggttattggtgtacgaaactgaagccaaaaaa
cttggtctagtcaaatga
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