Magallana gigas (Pacific oyster): 105318503
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Entry
105318503 CDS
T03920
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105318503
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
105318503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
RIF2_lid
Motif
Other DBs
NCBI-GeneID:
105318503
NCBI-ProteinID:
XP_034311413
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Position
LG10:complement(2935537..2973890)
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AA seq
1351 aa
AA seq
DB search
MSQKSIEDTIIDVVRDILHGEAIEAALCSVILHTEESLQWKKEHCFNSLKTALANVPQES
LDTALKCYITQIYNVQNASRVELLLDLLEGLVEYNVVPAKPICDALLDHELLSYNASLMW
TKTFQLMRKIIGGVDYKGCRDLLRGILEKCQGIKEDENVSVMPDIDTPVNLVAHILDRNV
CLLPAYLAVNEINKVCPEDRKWPHWKMGNILADFVHSFRPAAQMVTVSGRTHLLPVVGYS
IAISTSNVWRLSSSCLKFPLNGPLPYDKELSEPQTGLLRYVLEQPYSRDMVCNMLGLNKQ
VKQRCEVLEEQLVDLVVMAMERSENDDASNDECLSQLLWQHLSSQVIYFVLFQFASFPHM
VVSLYEKLKGRNLNKGRDHLMWVLLQFISGSIQKNPLKEFLPVMKLYDLLYPDKGMIPMP
DVTKAQSTHGVAATCIWIHLNKKAQTDTIKPPRPTPHALQEHCEFLKQSLNNKNLSLNDY
KIALLCNAYSTNNDYFNLPMGKLVESIYGDSKHTTLLPGNIVASAPTQPLAMSLLDSLTV
HAKMSLIHSIVHRVIKQAKSKATIAQSPALIETYSRLLVYMEIESLGIKGFISQLLPTVF
THNAWGILHTLLEMFSYRLHHTQPHYRIQLLSHLHHLSQSPQTNQNQLQLCMESTALRLI
TGLGSFEVQPQLSRIFNEPGRPGFLSNESEELNRVLVLTIARAMHVTGVDSFSSTWPREI
LNQIMANTPHNWSPNTLANFPPSLAEFFQAQPQHRDDKNTLKRNVEAEYKKWKTMANEND
IIAHFSMQGSSTVFLCIIWKTLLEENRGITPIAYKVLDRLGPRSVSAHLRTFSDYIVSEL
NLNSAGGQHFHKAIDSLNEMVWRYNIVTIDRLILCLALRNVDEDARLCYLLIHMLLLKPQ
DFKSRVQEFVKENSPEHWLQNNWHEKHMAFHRKYPEKFYFEGIQDLSSPIQHQYLPVYFG
NVCLRFLPVLDILLHRILEQPSLTTNNLNLFEKILESLGVLYKFHDHPITYLYNTLHYYH
KILVQRAAYKRRLVTTIWNAHQEIRPSTWFLTEDYQRFSHEESLEWVPDLDYYVRIIGRL
VDTIDGKSPFPNCDWRFNEFPGPAAHALYVTCVELMALPVPGNVVGNSLLDVVMKSSTQL
QRGKVMSWMNAVGLVLTALPETYWISLNNKIVETICSLPLTVQGGCQPFQVFNFTTSQTV
FAEQHMTYLLALSHAVWHHAGIGQLSQLSVFLRDHLKPVVKTEEQFLYVCHLVGPFLQRL
HSERTRSLMELVVELYEILVNVDKSCDHLRYLDPITDFLYHIKYMFVGDSVKNEIEKIIR
NFRQALTLRLRFISHINLEEAMTPLAPPMST
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaagtcgattgaggacacaattatagacgtcgtgagggatattttacatggc
gaggcaattgaggcagccctgtgttctgttatcttgcacacagaggagtctctacaatgg
aagaaagaacactgcttcaacagcctcaaaactgccctggcgaatgttccccaggaaagc
ttggacaccgctctgaagtgttacatcacacagatctacaacgttcagaatgccagccgg
gtggagctccttctggacctgttggaggggctggtggagtacaatgtagtccctgcaaag
cctatttgtgatgctctgttggaccatgagctgctcagctacaacgccagcctaatgtgg
accaagacgtttcagctgatgaggaaaatcatcggcggagtggactacaagggctgtaga
gatttacttcggggcatcctggagaaatgtcaggggataaaggaagatgagaatgtgtcc
gtcatgccagatattgacaccccagtcaacttggtggcccacatcttggatcgtaatgtt
tgcttgttaccagcgtatcttgcagtgaatgaaatcaacaaagtctgtcccgaggacagg
aagtggcctcactggaagatgggcaacatcctggctgactttgtccacagttttcgccca
gctgcccagatggtcactgtttctggtcggactcatctcttaccagtggttggatactct
atcgctatctcgaccagtaacgtgtggagactcagctcatcctgtctcaagttccccctc
aacgggccccttccttatgacaaggaactgtcagaaccccagaccggactattgcgctat
gttctggaacagccctactccagggatatggtctgtaatatgctgggactcaataaacag
gtgaaacaaaggtgtgaggtgttagaggagcagttggtggacctggttgtcatggcgatg
gaaaggtccgagaatgatgacgcctccaacgatgaatgcctcagtcagttgctatggcag
catttatccagccaagtgatttactttgtgttatttcagtttgcaagttttcctcacatg
gttgtgtccctttatgagaagctgaaaggccgtaacctgaacaaagggcgagaccacttg
atgtgggtccttctacagtttatatcgggcagcattcaaaagaacccgctgaaggagttt
ctgcctgtgatgaagctgtatgacctgctgtatcctgacaaggggatgatcccaatgccg
gacgtcaccaaggcccagtcgacccatggcgtggctgccacctgtatctggatccacctc
aataagaaggcccagacggacaccatcaaaccgcctcgccccaccccgcacgccctacag
gaacactgcgagtttctgaagcagagtttgaataacaagaatctgtcactgaatgactac
aagatagctctcctgtgtaacgcctacagcacaaacaatgactacttcaacctgccaatg
gggaaactggtggagagtatctatggcgatagtaaacacacaacattgttgccaggcaac
atagtggcctctgctccgactcagcctctagccatgagcctcctagattccctgacagtt
cacgccaaaatgagtttaatacacagtatagttcaccgtgttatcaagcaggccaaatct
aaggccaccatagcacaatctccggccctgatagagacgtacagccgactgcttgtttac
atggagattgaatctctggggataaaaggattcatcagtcagttactgcccactgtgttc
acacacaatgcctggggcatcctccacacactgctggagatgttcagctaccgcctgcac
cacacacagccccactaccgcatacagctgctgagccacctacaccacctaagtcagtcc
ccgcagaccaatcagaaccagctacaactctgtatggagagcacagccctcaggttgatc
acaggactcgggagttttgaggttcaaccccagctgtcccgaatattcaatgaaccaggg
aggccggggttcttgtccaatgagtcggaggaactgaacagggtgctggttctcaccata
gcccgggccatgcacgtcacaggtgtggacagtttttcctccacctggccgagagaaatt
ctgaaccagatcatggctaacacgccccacaactggtcccccaacacactggccaacttc
cccccgagtctggccgagtttttccaggcccaaccccaacaccgagatgacaaaaacacg
ctcaaacgcaacgtggaggccgagtataaaaagtggaaaaccatggccaatgagaatgac
atcatagctcacttctccatgcagggctcctccactgtgttcctgtgtattatatggaag
actttgctggaagagaatagaggaataacacccatagcatacaaggttttggatcgcctg
ggacctcggtctgtctcagcacatttacgcacgttttctgattacattgtctcggaactc
aatctgaattctgctggaggacagcatttccataaggctattgactccttgaatgagatg
gtatggcggtacaacattgttactattgaccggctcattctgtgtctggccctgaggaat
gtggatgaggatgccaggctgtgctacctcctgattcacatgctgctcctgaagccccag
gactttaagtcccgcgtacaagaatttgtcaaggagaattcccctgagcactggcttcaa
aacaactggcatgaaaaacacatggctttccaccggaaatacccggagaagttttacttt
gagggtatccaggacctgagcagtcccattcagcaccagtacctgcctgtctactttggg
aatgtctgtctccggtttctgccggtattagacatcttgttacacagaatcctggagcag
ccctccctgacaaccaacaacctgaacctgtttgagaaaattttggaaagtctgggagtg
ctgtacaaattccacgaccaccctatcacctacctatacaacacactacactactaccac
aagatcctggtccagagagccgcctacaaacgcaggcttgtcaccaccatttggaatgcc
catcaggagatccggcccagcacctggttcctgacagaggactaccaaaggttctcccat
gaagagagtctggagtgggttccagatctggattactacgtccggatcattggcagactg
gttgacactattgacggtaagagtcccttccctaactgtgactggagattcaacgagttc
cccggacctgctgcccacgccctctatgtgacctgtgtggaactgatggcacttcctgtc
cccgggaacgtggtggggaattccctgctggatgtcgtcatgaagagttccactcaacta
cagaggggcaaggtcatgtcatggatgaacgctgtaggactggtgctcacagctctgcca
gagacctactggatctctttgaacaacaagatcgtggagacgatttgtagtctgcctctg
acagtccagggtgggtgtcagccgttccaggtgttcaacttcaccaccagccagacagtg
tttgcagagcaacacatgacctacttactggccctgtctcacgcagtgtggcaccatgca
ggaataggacagctatctcagctcagtgtattcctccgggaccacctgaagccagtggtg
aagacagaggaacagttcctgtatgtgtgccacctggtggggccattcctacagaggctc
cactccgagcggacccgcagtctgatggagttggttgtagagctttacgagatcctggtc
aacgtggacaagtcatgtgaccatctccggtaccttgacccaattacagacttcctatac
cacatcaagtacatgtttgtgggggacagtgtgaagaatgagattgagaagattatccgt
aacttccggcaggccctgaccttacgtctgagatttatctcccacatcaacctggaggaa
gccatgaccccactggccccacccatgtctacctga
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