Magallana gigas (Pacific oyster): 105318623
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Entry
105318623 CDS
T03920
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crg01002
]
105318623
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105318623
Enzymes [BR:
crg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105318623
Peptidases and inhibitors [BR:
crg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105318623
Ubiquitin system [BR:
crg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105318623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
UBA_RAD5A
CUE
Motif
Other DBs
NCBI-GeneID:
105318623
NCBI-ProteinID:
XP_034312595
LinkDB
All DBs
Position
7:complement(30499001..30523297)
Genome browser
AA seq
2536 aa
AA seq
DB search
MEVEEEHVHTLLSMGFPESEIRRALRRAKNDLNEAVAYLTNDQTLPSDWEEVDDVEMKDI
HSRPSQTMYSPSPPPSYDDVHAMEQKTDENGENGGTEEENPLEFPVTNLYELEGRVFAEH
WSIPYKKEESLGKCLIAATRLAEANLTENDEHCRRFLERCMPESFQKLMTSGAVHRWNAE
IQEGIFNMAELFIDMCVARLQHLPIHHEILNILTLVFNKESEFHFKNRSKRDRTYWEDKL
EDGQLYTANTGYKSSIDPYGWLTHVINRFAFKGGFNVVRKLLENEELDAPSMAALLRPFG
MCAEFLNPKVVTEILAPGMEKTIKYIQNLEEKDLKEKKIGSVSDLLASMKLLCIQMWPQH
TESLDDLRLEVALRMLKSPHFNARMNALKEVTKLIEDATSNKVSKTAIDYKTILHWLVEN
KVLSIALEGNIDQVQYCEKVKGIVDFLGSEITIEELAMIWKMQVGQTNHVIDNIHSIIAA
AAVKFDSAQLENLFLLIQKKWQDDHNRMKEKLLRLIGKIGRDAKEPKTTTRVLELLWDLS
HLPTLSRQLIELALEEHLAILSDSFSVREQVKRNYVIKCVDDIRKGACVLPSLKQLLNIC
KNIMKQNNHKSEKGILHELNKNHDVIKLVTQSLIKLHKQALVTAGDGHLGPDIVVDTRYP
HSEYVTTHLQFLQYTLQEGALYLPWSRARDIWGTLIANSEACNWDRETCFEWFSKGLADL
EMDTQTQLFQKELLKLDPSKLTDKGFTCFKNFFENVNKYEHRLKTDGGRLVVEKSDLLGL
DYIWEICLNTPDEAIADKAIQLLLCVSYTNLAVRLKRDTVSLHKKFISECSNRLEAAMIG
MGGTAIAQAITWATKTLTAAIVKEVANVPPPSRSIKLMNIERLLWIAEVYVLNVEENHHT
TRIILPHGASFHGLQINLMITCESPKQEFILLCHGNETLGSVRGRIANKLRQPTDNVQIV
AQDKMLDSQKDQKLLHQLEFEDNQLIQVRLTTPTLQPLGKEPMTPTSKQSFDLEQEKMLP
GVVMAVEGQVFDMLYQLADLDESRITHRVRKLLMLIPTDPQISETLECIANKVPKQCAED
VSPRASPRKSTSASPLPSPRMSPKEVLKSLFDATAQDMSAFRVLYNLEVLSSKLMPISVD
LATRISSQAFCDDFLSVGGLQMVVNVLQAESLAPEVNYTIRQGCYAICLQLARFLLCGQT
VSMDADEAHAGNEESKTASNLQLASSPANTSFNKHSAGSHAVQTMDVHTFTETVSCFLRV
TWAAAAGRLHLIGTSQVMIDSSSGHGRRSRQSSTGSTASTGSESDCQSLHAGVCAKARDI
PTKDCNIAREALEILITCLQIRCELIASFYSLPCSSDFIIDILVGCTNADIRSAALEQFF
LLSQTECTAQRTPHHFMLQLLLKAYVPFWVSSSSARGVSQRLLGQCSQYFDLLCKLLEGL
STEDQGKLQMNPTSMLEDEVAWLGNFVPSIHPDMSDTDNSLLAGHLKLISTLLTCEGVDP
EENGRTLVYDILHDFLFPASKVMMDSMNTSNEEKLEEVNPKCGNCESRVAAYRLLIELAK
GNYAMLKDVCKQLIEMHHLPQPDCANEWEYLPPVDGRARCGFVGLKNGGATCYMNSVIQQ
LYMVPGIPEVVLGTEEDKPDEESVFFQIQQVLGHLLESKLQYHEPERFWKVFKLWGQTVN
IREQQDAFDFFQALIDQIDEHLKRNGKLEIFKRKFQGIFSDQKICKDCPHRYEREEAFLA
LNLTVKNATLQDSLDQFVKGELLEGDNAYFCDKCGEKRNTMKRMCIKTLPPLLCIQLKRF
GYDWEANRALKFDDYFKFPWILDMEPYTTDGMARREEVLETVDSSSESDSGESSSHEERV
LEIVASGNNVEQRQINYELVGIVVHSGQANAGHYYSFIKDRRGDMMSNPQKGKWFKFNDT
VVEEFEMTEDSLEAECFGGTYKAKILEPTTTLPDERVRYWNGYMLFYEKMEEPAKTPVSA
KKSKIQTRKAILEGGKGDLDSNSFMELTELVHKGEKKGIFMDEMPASIHQIIQAENLTFV
KNRDVYNTDYFRFIRDLVAVNMSKESHKDFQQMSVTALQLGIRFLFNTFFRCKKKTKTLL
DEWVDLIDEILEKSKEACDWLVEYLSGSEGSSYIKPFLLECPCRDVRYTMARLLERIMSS
HFRHGGVPTQKCFNEIVEIILHMLSKDVVDHCKNSYHYFQVIKSYVQLGTKSCSHMFLRQ
GFQRLIGFLIGNSGEINQGHDTPTRRWSSIQSREFGNLHASLAILVLNCDVSKYRREDPG
DYEIRKPKTVFPMKFLFMPQDMENYVFGAESSRYLREVIHAIREVGTSLIICDMLVYCSF
CNYQFSENVLKLLMHQYMTAPSNELKPVFSLLTELLMLEDPVQGQRIKVVIDGVTDSAGT
AYDGLLATVRLNHATDSRRSYTCIKFLVSLASKSAPVKDYLMQIPSKWQWAVNWLKKKMS
EYYYTPSSTSAISNEDSNRKSFQRTYSAQSTLEEAKALLTELEYQEGSPEMDTNDEEGQS
TAPSKDEVDDSNRKKT
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaggaggagcacgtacacaccctgctcagtatggggttcccagagtccgaa
ataaggcgggcccttcgaagggccaagaatgacctgaatgaagcagtagcttacctgacg
aacgaccagacgttgccgagtgactgggaggaggtggacgatgtagaaatgaaggacatt
cactcacggccgagccagacaatgtacagcccgtcccctcctcccagttatgatgatgtc
catgccatggagcagaagacagatgaaaatggagaaaatggtggcacggaagaggaaaac
cccttagaatttcctgtcaccaatctgtatgaacttgagggtcgtgtatttgctgaacac
tggtccattccttacaaaaaggaggagtcacttggaaaatgtctcattgctgcaacaaga
ctagcagaagccaacctcacagagaatgatgaacactgcaggaggttcctagagagatgc
atgccagagtcattccaaaagttgatgacttcaggggctgtacacagatggaacgcagaa
atacaggaagggatatttaatatggctgaattgtttattgatatgtgtgtagctcgcctt
caacatttacctatacaccatgagatccttaacattctcacactggtgttcaataaagaa
agcgagtttcattttaaaaaccgttccaagagagaccgtacatattgggaagataagctg
gaagatggtcagttatatactgcgaatactggctacaaatcttccatcgatccctatggt
tggttgacacatgttataaataggtttgccttcaaaggaggatttaatgtagtaagaaaa
ttattggaaaatgaagaattggatgccccatctatggctgccctccttaggccgtttggt
atgtgtgcagaattcctgaatcctaaggtagtcacagaaatactggcccctggaatggag
aagacaatcaagtacatacaaaacctggaggaaaaagacctcaaagaaaagaaaataggc
agtgtgtctgacctgctggcttctatgaagttgttgtgtatacagatgtggcctcagcac
acagaatctctggatgacctgcgattggaagttgcccttagaatgttgaaatctccacat
ttcaatgcccgaatgaatgctttaaaggaggtgacaaagctgattgaagatgccacctca
aataaagtgtccaagactgctattgattacaaaacaatactgcactggcttgtggaaaac
aaagttctctccattgctctagagggcaatatagaccaagtccagtattgtgaaaaggtc
aaggggattgtggactttttgggatctgaaatcacgatagaggagttagccatgatctgg
aaaatgcaggttggccaaaccaatcacgtgatagacaacattcactccatcattgctgca
gcggcagtcaagtttgactcggctcaacttgaaaacttgtttttgttaatacaaaagaaa
tggcaggatgaccataatcgtatgaaagaaaagctgttacgacttattggtaaaatagga
agagatgctaaggaacccaaaaccacaaccagagtcctagagctactgtgggatctctct
catttacccaccctgtcccggcagctgattgagttagcattagaagaacacctggccatt
ctcagtgattcctttagtgttcgagaacaagtcaagaggaactatgtcatcaagtgtgtt
gatgatatcagaaagggtgcttgtgtattaccatctctaaagcagctgcttaatatatgt
aaaaacattatgaagcaaaataaccataaatctgaaaagggtattttacatgaactgaac
aaaaaccatgatgtgattaagctggtgacccagagtctgatcaagctgcacaaacaagcc
ctggtgacggcgggggacggccacctggggccggacattgtggtggacaccagataccct
cactcggagtatgtgaccacccacctacaatttctccagtacaccttgcaggagggggcc
ctgtatctgccctggagtcgggctcgagacatctgggggacactcatcgcaaactcagag
gcctgtaactgggacagagagacctgctttgagtggttcagtaaaggtctagctgacctg
gagatggacactcaaactcaattgtttcagaaagaattgttgaaattggatccctcaaaa
ctcactgacaaaggtttcacctgttttaagaatttctttgagaatgtgaacaagtatgag
caccggctgaagactgatggtgggagactggttgttgagaaaagtgacctgcttggcttg
gactatatatgggagatttgtctcaacacgccagacgaggcgatagcagacaaggctatc
cagctccttctgtgcgtcagctatacaaatcttgctgtcagactcaaaagggataccgtg
agtctacacaagaaattcatatctgaatgctccaatagattagaggcagctatgataggg
atggggggaactgccatagcccaggctataacatgggccactaaaactctaacggcagct
attgttaaagaggtagctaatgtgcctccaccctcaaggtccataaagttgatgaatatt
gaacgtctgctgtggatcgcagaggtttatgttctaaacgttgaggagaaccatcacacg
accagaattatcctccctcatggagcctccttccatggcctacagatcaacctgatgatc
acctgcgagtcacctaagcaagagtttattctgttgtgccatggaaacgagactttagga
tctgtcaggggtcggattgctaacaaactccggcaaccaaccgacaatgtacaaattgtg
gcccaggacaaaatgttggactcgcagaaggatcagaaactgctgcaccagctggagttt
gaggataatcagctgattcaggtccgcctgaccacgcccactctacaacctctgggaaaa
gagcctatgactccaacttccaaacagagctttgatttggagcaagagaagatgcttcct
ggtgttgtgatggcagtggaaggacaggtgtttgatatgctgtatcagctagcagattta
gatgagtccaggataacacaccgagtgagaaagttgctgatgctaataccaactgatcca
cagatctcagaaactctggaatgcattgcaaacaaggtaccgaagcagtgtgcggaggat
gtaagccccagagctagtcctagaaagtccacatcagcgtctcccctccccagtccccgc
atgtcccccaaggaagtgctcaagtcactgtttgatgccactgcccaggatatgtctgca
ttccgagtgctttacaatctagaggtgttgagcagtaagctgatgcccattagtgtggac
ctcgccactcggataagtagccaggcattctgtgacgacttcctgtccgttggtggactt
caaatggtggtcaacgtcctacaggcggagtccctcgcccccgaggtcaactacaccatc
aggcagggctgttatgcaatatgtctgcagcttgcccgctttcttttatgtgggcagaca
gtttccatggacgcagatgaggctcatgccggcaacgaggaatcaaaaactgcatcaaat
ttgcagttggcctcatcccctgctaatacttcatttaacaagcattctgctggaagccat
gctgtacagacaatggatgtccacaccttcacagagacggtgtcctgtttcttgagggtg
acgtgggcggcggcagctggaagactccacctcatcggtacatctcaggtgatgattgac
agctcctcgggtcatggtaggagaagcagacagagtagcacagggagcacggccagcaca
gggagtgagagtgattgtcagagtctgcatgcaggggtgtgtgccaaggctcgggacatc
cccaccaaggactgtaacatagcgcgcgaggctctggagatcctcatcacatgtctgcag
atcagatgtgaactcatcgcctctttttattccctgccctgcagcagcgattttataatt
gatattttggtgggttgcactaatgctgacataaggagtgctgcactggagcagtttttt
ctcctcagtcagacagagtgcactgctcagcgtactcctcatcacttcatgctgcaactg
ctgcttaaggcatatgtccctttctgggtgtcgtcttcctcagctagaggggtgagccaa
aggttgttgggtcagtgttctcagtactttgatctgctctgtaaacttctggaaggcctt
tcaacggaagatcagggaaaacttcagatgaacccaacctcgatgctggaggatgaggtg
gcatggttggggaactttgtcccctccattcaccccgacatgtcagacacagacaacagt
ctgctggctggtcacctcaaactcatcagcacactactgacctgtgaaggggtggatcca
gaggagaatggaagaaccttggtgtatgatatcctccatgacttcctctttcctgcttct
aaagtgatgatggacagtatgaacaccagtaatgaggagaagctggaagaagtcaatcca
aagtgtggtaattgtgagtctcgtgtggcagcttacagactgctgatcgagttagccaag
ggaaactatgctatgttaaaagatgtttgtaaacagctgattgaaatgcatcatcttcct
cagccggactgtgccaatgagtgggagtacctcccccctgttgatggccgtgcccggtgt
ggcttcgtcggtcttaagaacggtggtgccacctgttacatgaactcagtcatccagcag
ctgtacatggtgccgggaattcccgaggtggtgctggggacagaggaggataaaccagac
gaggaaagtgtatttttccaaatccagcaagtgttgggacatttactggagagcaagctt
cagtaccatgaacctgaacgcttctggaaggtgttcaaactctggggtcagacggtcaac
attagggagcagcaggacgcctttgactttttccaggccctgattgatcaaatagacgag
catcttaagagaaatggaaagttggagatctttaaaagaaaatttcaaggaatattctct
gatcagaaaatatgcaaagactgtcctcataggtatgagagagaggaagctttcctggcg
ttgaatctgacggtgaagaatgctacactgcaggattccctggaccagtttgtgaagggg
gagctgctggagggggacaatgcctacttctgtgataagtgtggagaaaagagaaacact
atgaagaggatgtgcataaagacactgcccccattactgtgtattcagctgaagagattt
ggttatgactgggaggccaacagagctctcaagtttgatgactacttcaagtttccatgg
atattggatatggagccatacactactgacggaatggcccggcgggaggaagtattggag
acggtggacagtagttcggagtcggactctggggaatcctcgagtcacgaggagagggtc
ctggagatagtggcatcgggaaacaatgtagaacagcgacagattaactacgagttagtg
gggattgtggtccacagtgggcaggcaaatgccggccactactactcattcatcaaggac
cgcagaggtgacatgatgtctaatccacagaaggggaagtggttcaagttcaacgacacg
gtggtggaggagttcgagatgacagaggacagtctggaggccgagtgcttcggtggcacc
tacaaggccaagatcctggagcccactacaactctgccagatgagcgagtgcggtactgg
aacggctacatgttattctatgagaagatggaggagccagccaagacccctgtctcagct
aaaaaatctaaaatacagaccaggaaagccatactggagggagggaagggtgatttagac
tctaacagtttcatggaattgactgagttagtgcataagggagagaagaagggaatattt
atggatgagatgccggctagtatccaccagatcatacaggccgagaacctgacatttgtc
aaaaaccgagacgtctacaacaccgactacttcagatttatcagggacttggtggctgta
aacatgagtaaggagagccacaaagatttccagcagatgtccgtcacggcgctacagctt
ggcatacgcttcctcttcaacaccttcttcaggtgtaaaaagaaaacgaagactcttttg
gacgagtgggtggatttgatagatgaaattctggaaaagagtaaagaagcctgtgattgg
ctggtggagtatctcagtggttctgaggggtcgtcatatatcaaacccttcctcctcgag
tgtccctgtagggatgtcaggtacacaatggcgcggctcctggagaggatcatgtcctca
cacttcagacatggaggggtcccgactcaaaagtgcttcaatgagattgtggaaataatt
ctacacatgctgagcaaagatgtagtggaccattgtaaaaactcctaccattactttcaa
gtcatcaagtcatatgtacaactaggaacaaaatcttgcagccatatgtttttacgacaa
ggttttcagcgactgatagggtttttaatcggaaattcaggggagataaatcagggacat
gacacaccgaccaggagatggagttctattcagtctcgagagtttggaaacctccatgcc
tcattagcaatacttgtcttaaattgtgatgtatcaaagtacagaagagaagatcccggt
gattatgaaatacgcaaacctaaaactgttttccccatgaagtttctcttcatgccacaa
gacatggagaattacgtctttggagcagaatcatctcgttaccttcgggaggtaattcat
gccattcgagaggtgggaaccagtttaataatctgcgacatgctggtatactgcagcttc
tgtaactaccagtttagtgaaaacgtcctaaaacttctaatgcatcaatacatgacagct
ccctccaatgaactcaagcctgtcttctccttactaacagagctattgatgctggaggat
ccagtgcagggccagcgaattaaggtggtcattgacggagtgacggacagtgctggcacg
gcttatgatggtctgctagccaccgtgagattgaatcatgccacagacagccggcgatcc
tacacttgtatcaagttcctggtcagcttggccagtaagagtgctccagtgaaggactac
ctgatgcagatcccatccaagtggcagtgggccgtcaactggctcaagaaaaagatgtcg
gagtattactacactccttcctctacgtcagcaatctccaatgaggactccaacaggaaa
tccttccagagaacctacagtgcccagtccacactggaggaagctaaagcattactgact
gagctagagtaccaagaaggaagcccagagatggacacaaacgatgaagagggacaaagt
actgcaccctcaaaagatgaagtagacgattctaacagaaagaagacatga
DBGET
integrated database retrieval system
