Crassostrea gigas (Pacific oyster): 105318740
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Entry
105318740 CDS
T03920
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
105318740
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
105318740
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GFIT
Motif
Pfam:
LRR_4
LRR_8
TIR_2
TIR
LRR_9
Motif
Other DBs
NCBI-GeneID:
105318740
NCBI-ProteinID:
XP_011414295
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Position
LG5:complement(8972095..8974748)
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AA seq
577 aa
AA seq
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MLSLIIDGINCATGIGTYIRKHHLDGIRTTHLRKLSLANNRLELFERGVIYNLPKTLMFF
SIAGNKVTAGEYLIEMHTMSNVRVIDMSYQYHPQVNYPYSVLENCEEKVEKEMKTRFTGF
NTQAVLSGPNWSMPLPPNLETLYLQSARYIIKNPSFSLIAPNLRHVYLQNNFIMSNSGRI
IFPNNTIITCDISNNIFSHNPVNDGRHMKYLNISNNRFDKSFMTDTDGTIFATYTSLEVI
DMSFNNIFSLPTMLLKNSHKLRYINASNNRLSNWMVDLTEMPNLISLDLSENKFTTLSEG
DRNHFEKAFQNSNLSINLFRNGITCTCENQEFLIWIQKHKKHFLNFENYTCSTKHTYFDF
KNLRSSLAILKKQCASYLGWYIACAVTLATFLTFLISVLLVRNKWKIRYLIYKFRQRFGF
VVPFKKHLPTTMHYQYDAFISYCGRELMFVLKEVLPRIEVDKNLRLLIRDRDYIPGIPKV
DTIMSSLQESKRTVCIVSKKYLESKWRDYELNMAKVEGIKDRGSLDYVILILLPEVYNDE
IPHKIIDLIRKDRYIEYPMESCAYDDFWDRLIKMIEE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctttaatcattgatggaatcaattgtgcgacaggaattggtacatatatcagg
aaacatcatttggatgggattcgaacaactcatttgagaaaactgtcacttgctaataac
aggcttgaactttttgaacgtggtgtaatttataacttaccaaaaactttaatgtttttt
tcaatagcagggaataaagtgactgctggtgaatatcttattgaaatgcacacaatgtca
aacgtcagagtaatcgatatgagttatcaatatcacccacaggtaaactatccctactca
gtactagagaattgcgaagagaaagttgagaaagaaatgaaaactcgttttacaggtttc
aatactcaagcggtactaagcgggccaaattggagtatgcctctgcctccaaatttagag
actttgtatttgcaatctgccagatacataattaaaaatccaagtttttcccttatagca
ccgaatctgcggcatgtatatttacaaaataattttatcatgtctaatagtggtcgaata
atatttccaaacaataccataattacatgtgatatttcaaacaatatattttcccataat
ccagtgaatgatggccgtcacatgaagtacttgaatatttcaaacaacaggttcgataaa
agttttatgacagacacagatggtacaatatttgcaacttatactagtttggaggtaata
gatatgtctttcaataacattttctctctcccaacgatgctacttaagaactcacacaag
ttgaggtacataaatgctagcaacaacagactatcaaactggatggtagatctgactgaa
atgccaaatctaatatcattagatttgtctgaaaacaaatttacaactttaagtgaagga
gaccgcaaccattttgaaaaggcgtttcagaactctaatttgtctatcaatttgtttaga
aatgggataacttgtacgtgtgaaaatcaagaattcttgatttggatacaaaagcacaaa
aaacattttctaaactttgaaaactacacttgttctacaaaacatacttattttgatttc
aaaaatctaagatcttccttggccatcctgaaaaagcaatgcgcgtcatacttaggctgg
tacattgcttgtgcagtcacattagcgacattcctaacttttttaataagtgtactactt
gttcgaaacaaatggaaaatacggtatcttatttacaaattcaggcaaagatttgggttt
gtagttccattcaaaaaacatttgccaaccacaatgcattatcaatatgacgccttcatt
tcctattgtgggcgtgaattgatgtttgttctcaaagaagtcttacctaggatcgaggtt
gacaaaaatttaagactcctgatcagagaccgggactacataccgggtattcctaaagtt
gacaccattatgagcagtctacaggaaagcaaacggacagtttgcatagtgtccaaaaag
tatttggagtctaagtggcgtgactatgaactaaacatggctaaagtagaaggcatcaaa
gatcgtggatctcttgattatgtcattcttatactgttacctgaagtttataacgatgaa
attccgcataaaatcattgatctgattcggaaagaccgctacattgagtatccgatggaa
tcctgcgcttatgatgatttctgggatcgattaatcaagatgattgaagaataa
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