Crassostrea gigas (Pacific oyster): 105319208 Help Entry 105319208         CDS       T03920                                  Name (RefSeq) spliceosome RNA helicase DDX39B   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13] Organism crg  Crassostrea gigas (Pacific oyster) Pathway crg03013   Nucleocytoplasmic transport crg03015   mRNA surveillance pathway crg03040   Spliceosome Brite KEGG Orthology (KO) [BR:crg00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105319208   09122 Translation    03013 Nucleocytoplasmic transport     105319208    03015 mRNA surveillance pathway     105319208  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:crg03019]     105319208    03041 Spliceosome [BR:crg03041]     105319208 Messenger RNA biogenesis [BR:crg03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      105319208 Spliceosome [BR:crg03041]  Complex C   Other components    EJC/TREX     105319208  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     105319208 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII CMS1 AAA_19 P-loop_SecA Motif Other DBs NCBI-GeneID:  105319208 NCBI-ProteinID:  XP_011414937 LinkDB All DBs Position LG7:complement(46338919..46342154) Genome browser AA seq 422 aa AA seqDB search MSCDEMLRDYEEETSVSVSSVVPVEERRDKFSSIHSSGFRDLLLKPELLQAIKDRGYEHP SQVQHECIPQAVLSMDVLCQAKSGMGKTAVFVISTLQQIQESINDVVVLVIAHTRELAYQ IAHEYQTFSKYLPEIKVAVFFGGLPIKRDEEVLAKNRPNIVVGTPGRLLALVQKKKLTLD NLRYFIVDECDQVLKEIVMRKDVQAIFIRSPCAKQVMMFSATLNKDLRTVCKRFMSDPVE IIIDDESKLTLHGLQQYYIQMEENKKSRKICDLLDLLEFNQVIIFVNSISRCQALTSLLL EQNFPVLTIHRAMEQTERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIIINYDTPEES DTYLHRVGRAGRFGTKGLAITFVSNRSDAEVMNSVQERFEVGIEKMPTQVDVSSYIGTSE NA NT seq 1269 nt NT seq  +upstreamnt  +downstreamnt atgtcttgcgacgaaatgcttcgcgattatgaagaggagacatcagtctctgtcagttct gtcgttcctgtagaggaacggcgtgacaagttctcgtcaattcacagctcggggtttcga gatttgcttctgaaacctgagctgcttcaagccattaaagacagaggttatgaacatcct tcacaagtgcaacacgaatgtataccacaagccgttttgtccatggatgttctctgtcag gcaaagtccggaatgggaaagacagcggtgtttgttatatccacactccagcaaattcaa gagtccatcaacgatgttgttgtcttggtcattgcccacacacgggaacttgcataccag attgcgcatgagtaccagaccttttcaaaatacctgccagaaatcaaagttgccgtgttt tttggcggacttccaatcaagagggatgaagaggttctcgcaaagaaccgcccaaacatc gtcgtgggaacgcctggtcgtctgctggctcttgttcagaagaaaaagcttaccctggac aatctccgttacttcattgtagacgagtgtgatcaagtactcaaagaaatcgtgatgagg aaggatgtacaggccatattcatacgatcaccttgcgcaaaacaagtcatgatgtttagt gccactctcaacaaggatctgagaactgtgtgcaagcgatttatgagtgacccagttgaa attatcatcgacgacgaatcaaaattgacactccatggactgcaacagtattacattcaa atggaggaaaataaaaaatcgcgcaaaatctgtgacttgttggacctgcttgaatttaac caggtgatcatcttcgtgaattccatcagccgatgtcaggctttgacctctcttctcctg gagcagaattttcctgttcttaccatacacagggcaatggaacaaaccgaaagactgtcc cggtaccaacagttcaaagacttccagaagagaatactggtggccacaaacctgtttggt agaggaatggacattgaaagagtcaacattatcatcaactacgacacacctgaagaatca gacacgtatcttcacagggtgggtcgagctggtcgattcgggacgaaggggttggccatt acatttgtgtcaaaccggtcagatgcagaagtaatgaattctgtgcaagagagattcgaa gtcggaatagaaaaaatgccaacacaggtcgatgtatcgtcatacatcggtactagtgaa aatgcttga

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