Magallana gigas (Pacific oyster): 105319227
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Entry
105319227 CDS
T03920
Name
(RefSeq) TBC1 domain family member 9 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105319227
Membrane trafficking [BR:
crg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105319227
Endosome - Golgi transport
Rab GTPases and associated proteins
105319227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_5
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
105319227
NCBI-ProteinID:
XP_034326918
LinkDB
All DBs
Position
5:complement(13537089..13577715)
Genome browser
AA seq
1268 aa
AA seq
DB search
MWVKPEEVLLANALWVTERANPYFVLQRRKGYGGGGLTGLLVGTLDTVMDSKTPPYRILH
QTPASEISYSVSVANNRAEIHKDWEWIEQNMMETLGSFENEEDATEFVKCKIESMFTHEH
KTGEVDEEVENYKTSTRKFMKLFNMPKEEKLVNQYSCSLWKNNIPRQGWMYLSVNHLCFY
SFLMGKEAKVIIRWTDITKLEKGNNMLFPESIKVSTREGEFVFSMLLRSSETFRLMEQLA
NMAMKQLMQEGGFEEDKSIVDRTKKRTPKRMSSIKRDLDARARSDAFRSAFCLPLDEKLD
GDTDCVLWTPFNKQHVWGRLYLSSNYICFASRVDIVEQSMVTSQRQVRKRKVRREHPIIN
SQVRDLVIVVIPLREVVLVEKVDNAASGELGTDSLVVTTKGKHNFIFSQLPVREFILQKL
SDFLSRVEEPSDKSPSRQNSTCEPESSAPDEIQFQPALVSVFHRRNSDELSARETIKEHL
WNVHFSEFGRGVCMYRTHKTQELILQGLPEKFRGEIWMLFSGAINEMATNKGYYRNLVEQ
SLGKYTLASDEIERDLHRSLPEHPAFQSDLGISALRRVLTAYAWRNPTIGYCQAMNIVTS
VLLLYVSEEEAFWLLTSICERLLPDYYNTKVVGALIDQNVFKDLINENLPALHQKLEDLG
LLSMISLSWFLTIFLSVMPFNCAVSIMDCFFYDGARVIFQVALTILDNKQEELLEAKEEG
EAMTVLSSYLENITNKDSTMPHIAHTSSMCGSLAEKKEPSVDVAVLIDDSYRKYGHISNQ
DIDKLRLKYRLQVVQHIEDSTKKNVLRSVQTHTLFKGKELDDLFILFKEEYLTSCYWRTS
QQPADMGDKFDPSRPYYEMYKIDFEQFKTMYLSLSPWASGPRAGHLALRTFKFLDDNKDN
MINFKEFVYVLGVVCKGDITQKLKLLYLLHQLSPHELEDMASPSSASPVSTKTVESPESA
VEAADFFDSDASSVDALQDEIVLPGDPVEEDGETQEESQDTQSKEELPSTELIPDQDNNK
KADSQGAEGGGSQNVGGGPSGDVGLDILPKPEEEVTAEKEAELQESLKKMYAKKRELNRS
DSKAEFKDVPRMSQAQFIDMWRTLYDMFTDNEYEQQLYHSIATVGTLLLEMGEVGKKFYL
QKSVSESSTGENSSTKMESLSEDVEQLKMEESKDPSNSTENQTKEDSSSSQSELSQLDES
SAAGARSSYSKPDSDWSISFEQMVASVLTEQPLVTYFEKQCDMSEAVAKMRNRRLITRQS
SHFPEKKK
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcaagccagaagaagttttacttgccaatgcattatgggtgacggagagggca
aacccatatttcgtcctgcagagaaggaagggttatggagggggtggtctaactggactg
ctggtggggaccctagacacagtcatggatagcaagaccccaccctacagaatattacat
cagacaccagcatcagagatcagctatagtgtatcagtggccaataacagggcagaaatc
cataaagactgggaatggatagagcagaatatgatggagaccctgggttcctttgaaaat
gaggaagatgccacagaatttgtaaagtgtaagatagagagcatgttcacccatgaacac
aaaacaggggaagtggatgaagaggttgagaactacaaaacttcaacaagaaaattcatg
aagctttttaatatgcccaaggaagaaaagcttgttaatcagtactcgtgcagtctgtgg
aagaacaacatcccccggcagggctggatgtacctcagtgtcaaccatctgtgtttctac
tcttttctgatgggtaaagaggccaaggtcatcataagatggacagacattacgaaactt
gaaaagggtaacaatatgctttttccagagagcataaaggtatcaactagagaaggggag
tttgtgttttctatgcttctgagaagtagtgagacttttagattaatggagcagctggca
aatatggccatgaagcagctgatgcaagaaggtggtttcgaagaagacaaatctattgtt
gacagaactaagaagcgaacaccaaagaggatgtcctccattaaaagagaccttgatgct
agggcaaggagtgatgctttcaggtcagccttctgtctccccctagatgagaagttggat
ggtgacacagactgtgtcctttggacgcccttcaacaaacaacatgtgtggggccgcctc
tatctgtccagtaactatatctgctttgccagcagggttgatattgttgagcagtcaatg
gttacgtctcagaggcaagttcgtaagcgtaaagtcagacgtgaacatccgatcataaac
agccaggtgcgtgatttggttatcgtagtgataccactccgtgaagtggtactggtggaa
aaagtggacaatgctgccagtggtgaattgggaacagattctttggttgttaccacgaaa
ggaaagcataacttcatattctcacaacttccagtgcgtgagttcatcctgcaaaaactg
tcagatttcttatccagagtagaagagccctcggacaaaagcccctctagacaaaactct
acatgtgaaccagaatcatcagccccagatgaaatacaattccagccagctttggtgagt
gtatttcatcgacggaactctgatgaactgtcggcaagagaaaccattaaagagcacttg
tggaatgttcacttctcggagtttggcaggggtgtttgtatgtatcgaactcacaagaca
caagaactgatcttgcagggattgccagagaagtttagaggagaaatatggatgctgttt
tcaggagccataaatgagatggcaactaacaagggatattacagaaaccttgtggaacag
agtcttgggaagtacacactagctagtgatgaaatagagagagatctccacaggtctctc
ccagaacatccagcttttcagtccgaccttggaataagtgctctgaggcgagtgttaaca
gcgtacgcctggagaaatcccacaatcggttactgtcaggctatgaacatcgtgaccagt
gtgttgttgctgtacgttagtgaagaggaggccttctggttgttgacgtctatttgtgag
cgccttctccccgactactacaacaccaaggtagtcggggcattgattgaccaaaatgtg
tttaaggacctgattaatgaaaatctgcctgccctccaccagaagcttgaggacctaggg
ctcctcagcatgatctctctgtcctggttcctcacaatattcctcagtgtgatgccattt
aactgtgctgtcagcataatggactgttttttctatgatggcgccagggtaatcttccaa
gttgccttgaccattctggacaacaaacaagaggaacttctggaggcgaaagaggaggga
gaggccatgacggttctcagctcttaccttgagaacatcactaacaaggactccaccatg
cctcacattgcccacactagctctatgtgcggtagtctggcagagaaaaaagagcccagt
gtagacgtagccgtccttatagacgacagctacaggaagtacggacacatatccaatcag
gacattgacaaactccgactcaagtaccgtctccaagtggtgcagcacattgaggacagt
acaaagaaaaatgtgttacggagtgtccaaactcacacactgttcaaaggaaaggagtta
gatgatctatttattttatttaaggaggaatatttaacgtcttgttactggagaaccagt
caacagcctgctgacatgggggacaaattcgacccgtccagaccttactacgagatgtac
aaaattgattttgaacagttcaaaaccatgtacttgtctctctccccctgggcttctggc
ccaagggcaggacacctagccctcaggacattcaagtttcttgatgacaacaaagacaac
atgattaatttcaaagaattcgtgtatgtgcttggggtagtctgtaaaggggacataacc
cagaagctgaagctgctgtaccttctgcaccagttatctccccatgaattagaggacatg
gcttccccgtcttctgcatcaccagtcagtacaaagacagtagagagcccagaaagtgcg
gtagaggcagccgatttctttgatagtgatgccagttctgttgatgcactacaagatgaa
atagtactgccaggcgaccctgttgaagaagacggggaaacacaagaagaaagtcaagat
acccagtccaaggaagaactcccgtcaacagagctcattcctgaccaagataacaacaaa
aaggctgactcacagggagcagaggggggtggatcacagaatgtagggggtggaccctca
ggggatgttggattagatattctaccaaaacctgaagaggaggtcacagctgaaaaagaa
gcagaacttcaagaaagtttaaagaagatgtatgctaagaagagggaactgaataggagt
gatagcaaagcagagtttaaagatgtgcctagaatgtctcaagctcaatttattgacatg
tggagaacattatatgacatgtttactgacaatgaatatgagcaacaactttaccattcc
atagcaacagtgggcacattgcttttagaaatgggtgaagtagggaaaaaattctacctg
caaaaatcagtgtcagagagcagtacaggtgaaaactcatcaacaaagatggaaagctta
tcagaagacgtggaacagctaaaaatggaagaatctaaggacccatcaaactcaacagaa
aaccaaaccaaggaagactcaagctcatctcagtcagaattatctcagcttgatgagtca
tcagctgcaggggccagaagctcttactctaaaccagactccgattggtcaataagtttt
gagcagatggtagcatctgtgttaacagagcaaccgctggtcacttactttgagaaacaa
tgtgatatgtcagaggctgtggccaaaatgagaaaccgtagacttatcactaggcaatct
agtcatttccctgaaaagaagaaatga
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