Magallana gigas (Pacific oyster): 105319247
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Entry
105319247 CDS
T03920
Name
(RefSeq) uro-adherence factor A isoform X5
KO
K22237
Rab effector MyRIP
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105319247
Membrane trafficking [BR:
crg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105319247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
FYVE_2
Ig_3
ig
Ig_2
V-set
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
105319247
NCBI-ProteinID:
XP_011414998
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All DBs
Position
2:32686911..32746642
Genome browser
AA seq
1709 aa
AA seq
DB search
MRTDSSTMSRAAVTKHMNLEHLSDAECEKILQVLQKDFELREKEKERLHKIEECLKEEEE
KTEVIAVKTKLNEEVCVRCCQKFGIIFNRKQLCLVCKHYVCKRCADYNDSEKGYTCHACI
KERAEIEEQERDLKLKSFEWFYNNVSQKFKRFGSAKVVRSLYKQRGARGRAYHTDNESDT
GYDPNFLTSLRSGSRRGGGGGGGFSAPEDGGRDEEILGANSEGEPEIESIGPAPITATTN
ITRSRASSVETLNHDNKKSLYSNNNNHASSTAEVQVDNIPKEKSKEDIYKEAFEHYKGTE
EKKFNSKFGSLLHDLHQSLEQPVLSGGSSYGSTSYGEVLEKYRSRLRELLVGVSQRLEMA
VESFDSTPSQSATDTVQKVKKIVSKLVEESFGESIDVTSDEAVSDLSSLSDDSCDHQVKS
FEDQLAHAVVARVLENFSRDRNIDIPLDFIDGNALTNQVSDSRSHGSDNKSHPDLASRCA
SSDDENSVVTKIEHRSPSGGFSVDDLDVNEYSSDSELRLHSADSDSRKGSRQDRDAIDSS
YEVISVHELEGENSAEAEEDLVDGQGVDQRLSGEFREEEPELKEEDIITTESVQQTHNRQ
KDLEELKRIAKDINSPRRNVQCHDIQEQIEFDEEPIEPVIVNRDESKSEFESRLSTYDRL
HDTDKYSFPDFSEDYEDNEFFQNEVDPDLLSMNLAPILEEDEENYQEEDEENEEGASLHP
RNSDDKSWRDNWIFNRSGLSFNSSLGGGGLAGRTLDEVYVTVPQPDDDITARVGNSAYTE
KGELRDVDQMSDDLSEGHEDLMDDEVSFFAKSVDEIARITTRMTSSSPCLRPHSSTSVQT
VDSDTSLDTSVSLRSSVSKAEPTYIEELIPAEGDDPKFDIPPESMTVKEGEPAKFSCRVS
GTEPIEVIWYRVEDGELQQLEDSEDYEFTGDHNKHGATVFNTAKSMAGQLMCMVLNEKGH
CSQSFILKVRSNNQEMKKPEFLKEIEDQEVKEGQHVKFRAKVKGYPLPRVVWYKDGHLLK
NGTNYKIEKFGNRDYLLNVEYATPEDDAEYWVVAKNVAGEAKSTAQLIVQSKELDSSPNT
SASLSKNKDDQQLANMGRKLLMTHGQVTEETERMMESANKMSDMHSSLDQFDAMLSSFEA
EMEVSGSSTPRPPPPSEFADEDTLLKHDLRKGVENYNSMKDAASNIRNTTSSALKLLKST
ENLINSQPEEDAFASVSVRDSTLSPKSRQDQDNNNLSQNSTQKLLDNVVSEPVAKVPSLD
LSEVPNAKDTDHVTSETVIEESPASKTPQEIVKVRSDLLSEDEEPTVVNFGPKEVSGEMY
GRDFYVQTEKKTSPRHWEVKLPQYSSRGGSVMHPEGLHETEEEIYITYGHICHLEEKIHN
LEYCLNHTPLSHKRKLRDLEEEVALVVAHTNLSEQRVVNVERQLDLNNCPSISTGHAAED
SVSSLSPSLSIDSGFSSIREKPQQTQMFGESSEMDIPESRTEFNEDMGAAELPSVNRLKA
LFNAGKGDDSASVKRFENVLESGVHSITGRSVPKEKLEKYRNVLSPMSKPVQSSEQPTPG
KSTLNVTLSSKHPGTKHIDAEPTQIFPEKKGDFFPQSPNLRTSSSVTSTKTIASAKTKAA
PPPPSTNQGAAAATSVSRTQVQGSSGSRSNNEPSQSSSKVSSSQGALAKGKTRIRSGCIN
ARASFWEKRIHGEETKEEEFPEMVEHVDE
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacagactccagcaccatgagtcgagcggcagtcactaaacacatgaacctggag
catctcagcgatgctgagtgtgagaagatcctgcaagtgttgcagaaagatttcgaattg
cgggaaaaggaaaaagaacgtcttcacaaaatcgaggaatgtttaaaagaggaggaggaa
aaaactgaggtgattgcagtgaaaaccaagctgaatgaggaggtgtgtgtccgatgctgc
cagaagtttggaatcatcttcaatcgcaagcagctctgtcttgtctgtaaacactatgtc
tgcaaacgttgtgctgactacaatgacagtgaaaagggctacacctgccatgcctgcatc
aaagaaagagctgagatcgaggaacaagaaagggatttgaagctgaaatcttttgaatgg
ttttacaacaacgtcagtcaaaaattcaaaaggttcgggagtgccaaggtagtgcggtcc
ttgtacaaacagagaggagcccgggggagagcttatcacacggacaatgagagtgacact
ggctacgaccccaatttcctgacctctctcagatcagggtcccggcggggaggaggagga
ggaggggggttctccgccccagaagatggaggaagggacgaggagattctcggcgccaac
agtgaaggggaaccagaaattgagtccatagggccagctcctattactgccaccaccaac
atcacacgatctcgtgcatcctccgtggaaactctgaaccatgacaacaagaaaagcttg
tacagcaacaacaacaaccatgccagcagtacagcagaagtgcaagtcgacaacatcccc
aaggagaaaagtaaagaagatatatacaaagaagcctttgaacattacaagggaacagaa
gagaagaagttcaactccaagtttggctccctgctccacgatctacaccagtctttggag
cagccagttctgagtggagggtctagctatggaagtacttcatatggagaagttttggag
aaatacagatcaaggttacgggaactcttggttggtgtctcccagcgactggaaatggct
gtcgaaagttttgatagtaccccatcacaatcagccacagacactgtccagaaagtgaaa
aaaattgtctccaagctagtggaggagagttttggagaatctattgatgttacctctgat
gaagctgtgtctgatttgtcctcattgtcggacgattcctgcgatcatcaggtgaaatca
ttcgaggatcaactcgctcatgctgtggttgctcgggtgttagaaaacttcagtagggat
agaaatatagacattcccttagacttcattgatggaaacgctttaacaaaccaagtgtcc
gacagtagatctcatggctcggacaataaatctcatccagatctcgcgagtagatgtgcc
tcatcagatgacgagaacagtgttgtgactaaaatcgagcaccgctcgccgtcgggcgga
ttcagtgttgacgatttggacgtgaatgagtattctagtgactctgaactcagacttcac
tcggcagattcagattctaggaagggatcaaggcaagatagagacgctatagacagtagt
tatgaagtgatcagtgtgcatgagttggagggtgaaaattcagcagaagcagaggaggat
ctagttgatggtcagggtgtggatcaaagactttcaggggagtttagggaagaagaacca
gagttaaaggaggaagatataataaccacagaaagtgttcaacaaactcacaacagacaa
aaagacttagaggagctcaaacgcatcgccaaagatattaactctcctcgacggaatgta
cagtgtcatgatattcaggaacagattgaatttgacgaggagcctatagaacctgtgata
gtgaatagggacgagtcaaagagtgaatttgagtctcggttatccacgtacgatcggttg
cacgacacagacaagtattcatttccggacttctccgaggattatgaggataacgagttc
tttcaaaacgaggtagacccagatctgttatccatgaatcttgctccgattcttgaggag
gatgaggagaattatcaagaggaggatgaggagaatgaagaaggagcatctcttcacccc
aggaattctgatgacaagagttggcgtgacaactggatctttaacagatctggcctgtcg
tttaactccagcctggggggtggtggtctggccggcaggactctagacgaagtgtacgtc
accgtgccacagcctgatgatgacatcacagcaagagtgggaaacagtgcttacacggaa
aagggagaactcagggatgtggaccaaatgtctgatgacctttccgaaggtcacgaggac
cttatggacgatgaggtctcgttctttgccaaatccgtggatgagattgccaggattacg
acccggatgacctcctcctccccctgtctccgcccccactcctccaccagcgtgcagacg
gtggattcagacacatccttggacacctcagtctccctccggtccagcgtcagtaaagca
gagcccacctacattgaggaactgattcctgcagagggagatgatccgaagttcgatatt
ccaccagagagcatgaccgtaaaggaaggagaaccagccaagtttagctgcagagtcagt
ggaactgaacccatagaggtgatttggtacagagtagaagacggcgagttgcagcagttg
gaggactcggaagattatgagtttactggcgatcacaacaagcatggtgctactgtcttc
aacacggccaagagcatggcgggacagctgatgtgtatggtcctcaatgagaagggacac
tgttcacaatccttcattctcaaagtcagaagtaacaaccaagaaatgaagaaaccagag
tttttgaaagaaattgaagatcaagaggtcaaagagggtcaacatgtcaaatttagggca
aaggtcaaagggtatccacttcccagagttgtctggtacaaagatggacatctgctgaaa
aatggcactaattataagatagaaaagtttggaaacagagattacctattgaatgtggaa
tatgcaactcctgaggatgatgcggagtattgggttgttgccaagaatgttgcaggggag
gcaaaatcaacagcccagctgatagtccaatccaaagaactagattcctcaccaaatacc
agtgcatccctgagtaaaaacaaggatgaccaacaactggccaacatggggaggaagctg
ttgatgacccacgggcaggtcacggaggagactgagaggatgatggagtctgctaataag
atgtcagacatgcactcctcactggatcagtttgatgccatgctctcctcatttgaggca
gagatggaggtgtcgggttcctcaacgcctcgccctcctccgccctcagagtttgcggat
gaggacactctgcttaaacatgatctgcgtaagggtgtggaaaattataacagcatgaag
gatgcagcatccaacatacgaaacaccacctcatctgctttaaaactgttgaaatccact
gaaaatctcatcaactcccaaccggaggaagatgcatttgcctcagtctctgtaagggac
agcactctgtctccaaaatctaggcaagaccaggacaataacaatctaagccagaattcc
acacagaaactcttggacaatgtggtgtcggagccggtcgccaaagtacccagcttagat
ctctccgaagtcccaaatgcgaaggacactgatcatgtgacctccgaaactgtgatagaa
gaatcacctgcctcaaagacacctcaggaaattgtgaaagtgaggagtgatttgctcagt
gaggatgaggagccgactgtcgtcaattttggtccaaaggaggtttctggggaaatgtat
ggtagagacttctatgtacagacagagaagaaaacgtcgcccaggcactgggaggtcaag
ctaccacagtattcctcccgagggggcagcgtcatgcacccagagggcctccatgagacg
gaagaggagatttacataacgtatggtcacatctgtcatttggaggaaaaaattcataac
ctcgaatattgcttaaatcacacgcccctgtcccacaagagaaagctccgagacttggag
gaagaggtggccctcgtagtggcccacactaacctctccgaacagcgtgttgtaaatgtg
gagcgacagttggatttgaacaactgtccctcaatctccactggtcacgcagcagaagac
agtgtcagtagtctctctcccagcctctccattgattctgggttttcctccatacgggaa
aaaccacaacagactcagatgtttggagaatccagcgaaatggacattcccgagagccga
accgagttcaacgaggatatgggagcagcagaattgccgtcggtgaatcgtctcaaagca
ctgttcaacgcaggaaagggagatgactctgcatcagtgaagcggtttgaaaatgttcta
gagtcaggggttcacagtataacggggcgcagtgttcccaaggaaaagcttgaaaaatac
aggaatgttttgtcccccatgtccaaacctgtccagtcctcagaacaacccaccccagga
aagagcacactgaatgtgactttgtcttcaaaacacccagggacaaaacatatcgatgct
gagcccacccagatttttccggagaagaaaggagattttttcccgcaatcacccaatctg
agaacttcaagtagtgtcacctctacaaagacaatagctagtgcaaaaaccaaagctgct
ccaccccctccatcaaccaatcaaggagcagcagcagcaacatctgtgtcaaggacacag
gttcaaggtagctctgggtcaaggtcaaataacgaaccttcccagagttcatctaaagtg
tcttcctcacaaggtgctctagctaaaggtaaaacgagaattcggtctgggtgcataaac
gctcgagcctctttttgggagaagcgtatccatggagaggaaactaaggaagaggaattt
ccggaaatggtggaacatgttgatgaatga
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integrated database retrieval system
