Magallana gigas (Pacific oyster): 105319293
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Entry
105319293 CDS
T03920
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crg01002
]
105319293
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105319293
Enzymes [BR:
crg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105319293
Peptidases and inhibitors [BR:
crg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105319293
Ubiquitin system [BR:
crg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105319293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UIM
UCH_1
USP_UIM_N
UIM_2
Relaxase_C
Motif
Other DBs
NCBI-GeneID:
105319293
NCBI-ProteinID:
XP_034302253
LinkDB
All DBs
Position
2:36072923..36269270
Genome browser
AA seq
1117 aa
AA seq
DB search
MTVEQPTLPQHKIHAQRPRDAESLLFAKVKEVTGVNDDMVIRRACEACQDSNGKVKVEDV
VTVLLNDDSVHTKTKSKMVAFSPKNEITKCSESQPRQSTMNDNGKPNESVSVKQDVPYGP
LNKNQGVIDLTSDNSDQDDIQKAIAASLQETQGILAGQLSREEQDISRVLEQSLAESKAG
SKRKRGDVCFVDPLNPHERKRQEGCPVGLKNVGNTCWFSAVIQSLFHLRKFRHLVLNFKI
PKELLKENTDVTRNIRFMQELRYLFALMIGSQKKYVDPSKAVEILKEAFSSSASSGVGDS
QQDVSEFQHKLLEWLEDAFKSHLCRSSSPSLCGSSTGETRQNRNPMCELFYGQYRAEGTN
EGKGFSNEENFGQFPLQVNGFCDIHESLEAATAQGEIETISRDATQKSGQELWFTKLPPV
LTFEFSRFQFNQQLGRPEKIHNKIEFPHVIYMDRYLDCNKNDTRQRREEVRKLMEELVVL
YARLDKFNHYGSGSKKVPLQDVLTYALEFAQNKPGLNTLEDVDMQSSKSSNNMNADMKKQ
ELRFEMANEVCCSLSTDVEMTAIPSTPVKENKDINCISDPAPRQVSDNELQVLQECLHRW
RTEVEQDVKELQEKISKLEAMKNSMYSDETLKQYPYQLHAVLVHEGQAAAGHYWAYIYDS
MNEKWLKFNDIAVTCTSWDDLVKESVGGYHNASAYCLMYVQQSNMEPYTEPPTDFPPQSY
IEKLPEDLKEFVVQDNKKFAQEMLDWDEAQARKPVTPTGESRNKEGGDGDAKQERAVLKN
PSSQTASTQTPIVIKSNLPVQHAEMLVEETRKQLSLVLKLENYLMKGPETILKLAIEKEL
KHMDQIFLSLAQKVPREDPRLLYPVVYLRCCTAPARVIDQFLHEQFSYCPVDGDKRAEEV
KKAAINWLKVQHQVSDGDVLEKNTQNWHEKYNQFRKIAFLFVRGLQLFHNERYEDALLYL
VHCHVLNGNLVDKNNEQWGLEKKLVNFYRRQCLLHLNDMATSQFQSKDDIRDSLKLMNDF
VVPCLPLLLTSSYQDDISAGEEMREKWCSFLGQEICEDKIEKLQDLMSKLFDPPTESKSA
QIAAVTSKDLKDLYKNYMDVMNIAYNSGYIERAINSS
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgaacagccgactttaccacaacacaaaattcatgcacagagacctagagat
gcagagagtctgttgtttgcaaaagtcaaagaagttactggggttaatgatgacatggtg
ataaggagagcatgtgaagcctgccaagatagtaatggaaaagtaaaagtggaagatgtg
gttacagtcttattgaatgatgactcagttcacacaaaaacaaagtctaagatggttgca
ttttctccgaaaaatgaaattactaaatgctctgaatcacaacctcgacagtcaacaatg
aacgataatgggaaaccaaacgagagtgtttctgttaaacaggatgtaccatacggtcct
ttgaacaagaaccaaggtgttattgatttgactagtgataatagtgaccaggatgatatt
cagaaagccatagctgcaagcttacaagaaacacagggaattttagctggacaattatca
agggaggagcaagatatcagcagagtattagaacaaagtctggctgaaagcaaagcagga
tcaaagaggaagcgaggtgatgtgtgttttgttgatccactgaatccacatgaaagaaag
agacaagaaggctgtcctgtaggactaaaaaatgttggaaatacatgctggtttagtgct
gttattcagtctctctttcatttacggaaatttcggcatttagttttaaacttcaagatc
ccaaaggagttattgaaagaaaatacagatgtgacaagaaacatccgctttatgcaggag
cttcgatatctatttgctctgatgattggctctcagaagaaatatgtagacccatcaaag
gcagtagagatattgaaagaggctttctcctcatctgcatcctctggtgttggtgacagt
cagcaggatgttagtgaattccaacataaactactagaatggttggaggatgctttcaag
tctcatctatgtaggtcttcatctccttcactgtgtggtagtagtactggagaaacaagg
caaaataggaatccaatgtgtgaattgttttatggacaatacagagcagagggtaccaat
gaagggaaaggatttagcaatgaagaaaattttggtcaatttcctctacaagtgaatggt
ttctgcgacattcatgaaagtttggaggccgccacagctcaaggtgaaattgagacaatc
agcagagatgctacacaaaaatcaggacaagagctgtggtttacaaagcttccacctgtg
ttgacctttgaattttcacgttttcaatttaatcaacaactaggaagaccagaaaaaata
cacaataagatagaattccctcatgtaatatatatggataggtatttagactgcaacaaa
aatgatactcgacaacgaagagaagaagtcaggaaattaatggaggagcttgtggttttg
tatgccagattagacaaatttaatcactatggatcaggaagtaaaaaagttcccttgcaa
gatgttcttacatatgctttggaatttgctcaaaacaaaccaggattgaacactttagag
gatgtggacatgcaatcttccaagtcgtccaacaacatgaatgcagacatgaaaaaacag
gaactcagatttgaaatggcaaatgaagtttgctgttccctgtctacagatgttgaaatg
actgcaattccttctactccagtaaaagaaaataaagatataaattgcattagtgatcca
gctccacgccaagtcagtgataatgagttgcaggttcttcaggaatgtcttcataggtgg
agaacagaagtagaacaagatgtaaaggaattacaggagaaaataagtaaactagaagca
atgaaaaacagtatgtattcagatgagactttgaaacagtatccgtatcagttacatgct
gtgttggtgcatgaaggacaggctgctgccggccattattgggcctacatttatgactcc
atgaatgagaagtggcttaaatttaatgacattgctgtgacctgtacatcatgggatgac
ttggtgaaggagagtgttggaggatatcataatgctagtgcatattgcttaatgtatgtg
cagcagtcaaatatggaaccctatacagagccccctacagactttccaccacagtcttat
atagaaaaacttccagaagatttaaaagagtttgttgttcaggacaataaaaaatttgct
caggagatgctagattgggacgaagcacaggctagaaaaccagttactcccaccggagaa
tccagaaataaagaaggaggggatggagatgcgaaacaagaaagagcagtactcaaaaat
ccttctagtcaaacagcaagcacacaaactcccattgtaatcaaatcaaaccttccagtt
cagcatgcagagatgcttgttgaggaaaccaggaagcagttgtcacttgtattaaaactt
gaaaattacttaatgaaaggaccagagactattctaaaattggctatcgagaaggagctg
aaacacatggatcaaatttttttgagccttgctcaaaaagtccctcgtgaagaccctcgc
ctgttatatccagttgtgtacctcaggtgttgtactgcaccagcaagagtcatagatcaa
tttttacatgagcaattttcttactgtccagttgatggggataaaagagctgaagaagtt
aaaaaagctgcaataaactggttgaaagttcagcatcaagtttctgatggtgatgtactg
gaaaaaaatacccagaactggcatgaaaaatacaatcaatttaggaaaattgctttcctg
tttgttagaggactccagctcttccacaatgaaagatatgaagatgctttgttgtattta
gtccattgccatgtgttaaatggtaacctagttgacaagaataatgaacagtggggtttg
gagaaaaaattggtcaatttttacagaagacaatgcttgttgcatcttaatgatatggct
actagtcagtttcaatctaaagatgacattcgagatagcttaaagttgatgaatgacttc
gtggttccctgtcttcctttacttctaacctcaagttatcaagatgatatcagtgcagga
gaagaaatgagagaaaagtggtgctcgtttttgggacaagaaatatgcgaggataaaatt
gaaaagcttcaggatttaatgtcaaagttgttcgatcctccaacagagagtaagagtgct
cagattgcagctgttacatcaaaagacttgaaagacctttataaaaactatatggatgtc
atgaacattgcctataactcaggatatattgagagagctatcaacagcagttaa
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integrated database retrieval system
