Magallana gigas (Pacific oyster): 105319399
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Entry
105319399 CDS
T03920
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105319399
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105319399
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105319399
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-CCCH_3
zf-rbx1
zf-RING_5
zf-C3HC4_4
IBR_1
Motif
Other DBs
NCBI-GeneID:
105319399
NCBI-ProteinID:
XP_034307215
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All DBs
Position
4:12427178..12434041
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AA seq
418 aa
AA seq
DB search
MAEGGTESPSWSSRIQCRYFLHGVCQRGNNCQYAHDKSAKPSNVCRYYLAGNCSYGVGCR
YDHTRPKPPVSKQAPLQRTLNPLQSKTEISELKMTSLKKGGQTKPPELPSTPKPPEQWVK
ASEFVPGKPYICSTIPASYAKAAKDEEQDLPPPFEEVQVSDGQLLCPYLAKGVCPYESEC
EYIHGDICEMCGYAVLHPTDKTQREEHAKICVAELEENMEHSFAIARSKDKACGICMEIV
MEKQPPSEQRFGIMSDCNHIFCLSCIRKWRGAKQFERKIVRACPECRVNSNFVTPSKYWV
DTDDEKNKIIGGYKDALSNKACKYFKQGTGDCPFNDKCFYMHAYPDGTKATPKPRERRRR
QNAEGDLDIMARINLWDFLEEFDNRLDQLFLLELEAEMDSYADMWYLGDDTSSEDDYY
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggggggacagaatcgccgtcgtggtcgtcccgcatccagtgcaggtatttt
ctccatggtgtttgtcaaagaggaaacaattgtcagtatgcacatgataaatctgcaaaa
ccatccaatgtctgtcgatactacttggctgggaactgctcatatggtgtaggatgcaga
tatgaccacacaagaccaaagccaccagtttcaaaacaagcacctttacagagaactcta
aaccctttacaaagcaaaacagaaatttcagaactaaaaatgacatcactgaaaaaggga
ggccagacaaaaccaccagagctgccatccacacccaaacctccagagcagtgggtgaaa
gcctcagagtttgttcctggaaaaccatatatttgttcaacaattcctgcttcatatgcc
aaagctgccaaagatgaagagcaagatctgccacctccgtttgaggaggtgcaagtttct
gatggacagttactatgcccatatttagctaaaggggtgtgtccctatgaatcagagtgt
gaatatatccatggagacatttgtgagatgtgtggatatgctgtcctccatcctacagac
aaaacacagagggaagaacacgccaagatatgtgtggctgaactagaagagaacatggaa
cactcgtttgccattgcacggagcaaagacaaggcctgtgggatatgtatggagatcgtc
atggagaaacagcccccctctgagcaaaggttcggcatcatgtcagactgtaaccatatc
ttctgtctctcatgcatcaggaaatggagaggggcaaaacaatttgaaaggaagattgtt
agggcttgtcctgaatgcagagtaaattccaactttgtgacacccagtaaatactgggtt
gatactgacgatgagaagaataaaattattgggggctacaaggatgcattaagcaacaaa
gcatgtaaatatttcaagcaaggtacaggagactgtccattcaacgacaagtgtttctac
atgcatgcctatccagacggaacaaaggccacacccaaacctcgggagagacgacgccga
cagaatgcagagggggacctagacataatggcccggataaatctgtgggatttcctggag
gagttcgacaatcgtctggatcagttgtttctgttagaactagaagctgagatggacagt
tacgcagatatgtggtatctcggggacgacacttcatccgaggatgattactattga
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