Magallana gigas (Pacific oyster): 105319857
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Entry
105319857 CDS
T03920
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105319857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crg03400
]
105319857
Enzymes [BR:
crg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
105319857
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105319857
Prokaryotic type
105319857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
105319857
NCBI-ProteinID:
XP_011415861
LinkDB
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Position
8:complement(10929408..10935880)
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AA seq
336 aa
AA seq
DB search
MFSFRLAIGCRNMSGQAKISSFFTQSTNKRVISNGDTVSKTPSPKKRKIDEKGEDTTSVK
ENIELSPNAQTPPSPPPTPTALSPEQKSKIEQNKLAARIKLAAKTSNGLLVDVGSSWFKA
LEPEFSKQYFTELSKFVMAERSKNTIYPPAHDVFSWTNYCTIDKVKVVILGQDPYHGPKQ
AHGLCFSVQKGVPPPPSLQNMYKELTEDIPGFSHPGHGTLIGWANQGVLLLNACLTVRAG
QANSHKDKGWEKFTDAVISWLNKNKKGLVFMLWGSYAQKKGAHIDKKKHHVLTGVHPSPL
SAHRGYFGCKHFSKCNELLKKEGKSIIDWKHLPPQE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtttcagactagccatcggatgtagaaatatgagtggacaagctaaaatatcc
tcatttttcacacaatcaaccaacaagcgagtgattagtaatggagatactgtgtctaaa
acaccaagtcccaagaaacgtaaaattgatgagaagggtgaagatacaacatcagtaaag
gagaacatagaactcagtccgaatgcccagacccctccctcaccacccccaacccccacg
gcattgtcaccagagcagaaatctaaaatagaacagaacaagttagcagccaggataaaa
cttgcagccaagacatctaacggtctcttggtggatgttggttcatcatggtttaaagct
ctagagcccgagttctccaagcaatactttacagagctatcaaagtttgtgatggcggag
agaagcaagaatacaatctacccccccgcacatgatgtcttcagctggacaaactactgc
accattgacaaagttaaagttgtaattcttggacaagacccatatcatggacccaaacaa
gcacatggtttatgttttagtgttcaaaagggagtcccccctccaccaagtttacagaat
atgtacaaggaactgaccgaggacatccctgggttctctcatcctggacatggtacactg
ataggctgggcaaatcagggggtattactactgaacgcctgtctgactgtaagagccgga
caagccaactcccacaaggacaagggctgggagaaattcaccgatgctgtcatctcatgg
ctcaacaaaaataagaagggactggtattcatgttatgggggtcgtatgcccagaagaaa
ggtgcacacattgacaagaagaagcaccatgtgttaacaggagttcatccatcaccattg
tctgcacatcggggatattttggctgtaagcatttctctaagtgtaatgaactcttaaaa
aaggaggggaagtccatcatcgactggaagcatctcccaccacaagagtaa
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