Magallana gigas (Pacific oyster): 105320117
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Entry
105320117 CDS
T03920
Name
(RefSeq) probable splicing factor, arginine/serine-rich 6 isoform X2
KO
K12896
serine/arginine-rich splicing factor 7
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105320117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105320117
Spliceosome [BR:
crg03041
]
Common components
Common spliceosomal components
SR proteins
105320117
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
105320117
NCBI-ProteinID:
XP_011416219
UniProt:
K1PDF8
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All DBs
Position
5:8797777..8802467
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AA seq
231 aa
AA seq
DB search
MSRRGDGSLFIGRLSKNTQPRHLEDVFEPYGRLIRCDVKYGAEMAYGFVDYEDRRDAEDA
LKYENGREICGSSIRVEWAKGNPRRPYAASSNRGGGMYDECYRCHRTGHFARDCPNDSSY
GFRRSRGGEGGGRGSSGGGGGGRYGSRRRSRSRSRSPYKRRRSYSRSRSRSRDRRRSRSA
SGDRRRSRSRSASKSRSRSRSISRSKSRSPINEGGDAKAGSRSRSPPSDHE
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacgaggtgatggcagcttattcattggcaggctgagtaaaaatacccagcct
cgacacctagaagatgtgtttgagccatatgggcgattaataagatgcgatgtcaaatat
ggtgcagagatggcctatggttttgttgactatgaggacagaagagatgcagaggatgct
ttaaaatatgaaaatgggcgcgagatttgtgggtccagtattcgagtagaatgggcaaaa
ggaaatccaagaagaccatatgcagcatcatcaaatagaggcggtggtatgtatgatgag
tgttaccgctgccacagaactggtcactttgcacgggattgtcccaatgacagctcttat
ggtttccgtcgctccagaggaggagagggagggggtaggggcagcagtggagggggagga
ggaggacgatatgggtctcgccgcagaagcagatctcgatctagatccccttacaaaaga
cgaagatcttactccagaagtcgcagcagaagtagggacaggaggcgatccagatcagca
agtggagatagacgcagaagtcgttcaaggagtgcatcaaaatcccgcagtcgctccaga
tccatcagtcgttcaaagagccgatcaccaatcaacgagggcggggatgctaaggcaggg
tcgagatcccgcagtcccccctctgaccacgagtag
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