Magallana gigas (Pacific oyster): 105320203
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Entry
105320203 CDS
T03920
Name
(RefSeq) protein transport protein Sec23A isoform X1
KO
K14006
protein transport protein SEC23
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105320203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105320203
Membrane trafficking [BR:
crg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
105320203
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
105320203
NCBI-ProteinID:
XP_011416352
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All DBs
Position
6:2830694..2838259
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AA seq
781 aa
AA seq
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MATYQEFIQQNEDRDGVRFSWNVWPSSRIEATRMVVPLGCLFTPLKERPDLPPIQYDPVL
CTRPTCRAILNPFCQVDYRAKVWACNFCFQRNPFPPQYAAISDQHQPAEIIPQFSTLEYT
ITRATCHPPVYLIVLDTCMDEEDLQAVKESLQMSLSLLPPNALIGLITYGKMVQVHELGC
EGCSKSYVFRGTKDLTAKQIQDMLGLQRGGTTQQQRGPTQQQQQQLPSNRFLQPVHKCDM
NLTDLLGELQRDPWPVSQGKRPLRSTGVAMSIAVGLLECTFPNTGARIMLFAGGPCTQGP
GMVVDDELKNPIRKHLDIEKDNVKFMKKAMKHYEMLANRAAKNGHVLDIYACALDQTGLH
EMKFCPRYTGGHMVMGDSFNTSLFKQTFQRVFSKDAKGEFKMGFGATVEVKTSRELKVSG
AIGPCVSLGVKGPSVSDTEMGLGGTSQWKMCGLYPNTTLALFFEVVSQHNAPIPQGGRGY
LQFITQYQHSSGQRRVRVTTLARNWADASTNIQHIAAGFDQEAAAVLMARTAVFRAETDD
GPDVLRWLDRMLIRLCQKFGDYQKDDPNSFRFSENFSLYPQFMFHLRRSQFLQVFNNSPD
ETSYYRHMLNVEDLTQSLIMIQPILYAYSFNGTPEPVLLDTSSIQPDRILLMDTFFQIVL
YHGETIAQWRKQGYQDQPEYENFKQLLNAPVDDAQEILQTRFPMPRYIDTEHDGSQSRFL
LSRVNPSQTHNNMYGWGQQSSGMIISSSESYQDGGAAVLTDDVSLQVFMEHLKKLAVSSS
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggctacctatcaagaatttatccaacagaatgaggacagagatggcgttcgcttcagc
tggaacgtctggccctccagccgtattgaggccactcgtatggtggtcccactaggatgt
ctgtttacacctctgaaagagcggccagatctgccacccattcagtacgacccagtgctg
tgtactaggcctacatgtcgagccatccttaaccctttctgtcaggtggattacagggct
aaggtctgggcctgcaacttctgtttccaaagaaacccgtttccgccccagtatgcagct
atttcagatcaacaccagcctgctgagatcatcccacagttctcaacactggagtacaca
atcactagagccacatgtcatcctcctgtgtatcttattgtccttgacacctgtatggat
gaagaggatttgcaggctgtcaaggagtctttacaaatgtccctgagcttgctgccacca
aatgccctcattggattaataacatacgggaaaatggttcaggtccatgagttgggctgt
gagggctgctcaaagagctacgtattcaggggaaccaaagatttgacagctaaacagatt
caggacatgttgggattacaaaggggtggtacaacacagcaacagaggggccctacacag
caacagcagcagcagttgccctcaaacagatttttacaaccagttcacaagtgtgacatg
aacctgacagacttgctcggagagcttcaaagagatccctggcccgtgtcccagggaaag
agaccccttaggtcaacgggtgtggccatgtctatagctgtgggtctgttagagtgtaca
ttcccaaacacgggggcaaggatcatgctgtttgccggtgggccctgtacacaaggacca
ggcatggttgttgatgacgagctgaagaatccaatcaggaaacatttagacatcgagaaa
gacaatgtgaagttcatgaagaaagcaatgaagcattatgagatgttggccaatcgagcg
gctaagaatggtcatgttcttgatatatatgcttgtgccttggaccagacaggattacat
gagatgaagttctgtcctagatacactggtggtcacatggtgatgggtgattccttcaac
acctccctcttcaagcagactttccagagggtgttctccaaggatgctaagggagagttc
aagatgggctttggtgctactgtggaagtcaagacatcgcgggagctgaaagtgtctgga
gccattggaccctgcgtgtctctaggggtgaagggaccgagcgtgtccgacacagagatg
ggcctggggggcacctcccagtggaagatgtgtggactctacccaaacaccaccttggct
ctattctttgaggttgtcagtcagcacaatgctccaattccccagggagggaggggttac
ctacagtttatcacccagtaccaacactccagtggacagcgcagggtcagggtcaccaca
ctggccaggaattgggccgatgctagcaccaacatccagcacattgcggcgggatttgat
caggaggcggcggctgtactgatggcacgaaccgccgtgttccgagcggagacagacgac
ggaccagacgttctacgctggctagatagaatgttgattagactgtgtcagaagtttgga
gattaccaaaaagatgatccaaactctttccgtttctcagagaatttctctctctatcct
caatttatgttccatctgagacgctcacaatttttacaagtttttaacaacagtcctgat
gaaacatcctactatagacacatgttgaatgtagaggacttgacacagtccctcattatg
atacaacctatcctgtatgcctactcctttaatggaactcccgagcctgttttactggac
accagcagtatacagccagacaggatcctgctgatggacacgttcttccagatagtgttg
taccacggagagacgattgctcagtggaggaaacagggataccaagaccagccagagtat
gagaactttaaacaactcctcaacgcccccgtggacgatgctcaggaaatcctacagacc
cggttccccatgccccgatacattgacacggagcatgatggctcccagtctcgtttcttg
ctttcccgagtgaatccctcacagacacacaacaacatgtatggatggggacagcaatca
tctggaatgatcataagctcatctgagtcctatcaggacggtggtgctgctgtgctaacg
gacgacgtcagtttgcaggtgtttatggaacatttaaagaaactcgctgtgtccagctca
tcgtga
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