Magallana gigas (Pacific oyster): 105320384
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Entry
105320384 CDS
T03920
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105320384
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
105320384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Ctf4_C
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
HMG_WDHD1
WDR55
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_WDR19_2nd
HMG_box
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_ACSF4
Beta-prop_VPS8
DUF6476
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Ge1_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
105320384
NCBI-ProteinID:
XP_011416613
UniProt:
K1REU2
LinkDB
All DBs
Position
6:12836368..12850694
Genome browser
AA seq
1015 aa
AA seq
DB search
MPSCSPLRYAHSEGLTSLCYDDKGKYILTCGSDGDVRIWEGAEDDDAISHGTGDKAFCVA
YKNDRFYIATDANTVQAYTFPGGSPDGILARFTAPANHFCINQMVTTLVAGSSDFTIKLV
DISSGDTKKFEGHEAPVLSVALDPKEEFLASSSCDGSVVIWRVENKEKVKKFQILPKVGD
ISLTKGLCRLCWEKNGQFLYVPLENEIQIYDRNSWSTTGSIQDSQFSGVYSVLDLSTDGT
HLAAGCYDGHILIFDLKTKTCVDRFKHESGLSIMSLSWNPSNQTEIAFCDREGQLGLLSE
INLKGGNQPVKEQRVKETLGIFEDDDDDAELVQASDEPSKEQIFDEDSNDSTPASVLKPL
DDDLASEDGEAPPVIPVQTRIIERPGFVPTPPQGAFQPGSTPKHLSSRFMMWNAVGIIKQ
FNTEEEESIDIEFHNTAIHHAMHLTNSAGYTMGDVSTEAVVLASPGEDSDPSKLTCMHFG
SWDNSKEWTIPMDDGEAIEALAIGEDWIAVATSGRLIRIFSLGGIQRDIFSIPGPVVCLS
AHTNQLLIAYHRGMGLPGDQCLGVHLMTVEGATQINHQPLPLSHKSSLAWMGFSAEGTPF
YMDTSGIVRMCNRRFGMSWVQVANTKSHTKGKSDNYWIVSVHENPQQLRCIPCKGARFPP
VLPRPAVGILPFQVPLCQMNTEKSQYEEVFHRTQLLSSHLQFWNTIGYEYDTSIASELAK
PSQEALMKLFALSARSDREFRALEVCEMMSEPHTLQLAIKYACRLKYMQLAERISEVVQR
KSAEQAEEVEEEEKEVVHRVQRVHNHQNHVQEDEEMEEEDVEVDQENAETNSAGGPLLNL
KAKSKNEVLSQSYGSSGRSNPFKVLTPQKPEPTKGTQVFDGMSKKKQTSPGQVMLKNTRP
VKAVKRTPQSQGKITSVKSTNEEDKQEESQKKSKSAFDLWFEETKSQLMEELPEADEESL
VQTAAERFRKIPKEERQIWIQKSKEGDNKKRKREEEEIPTRKVNPKLAGFAFSKD
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcctgttcgccgttgcgatacgctcacagcgaaggattaacaagtttgtgctat
gacgataaaggaaaatatatcttgacctgtggctcagatggagatgtcagaatatgggaa
ggggcggaggatgatgatgctatatcccatggaactggtgataaggcattctgtgttgca
tacaagaatgacagattttacatcgctactgatgcaaacactgtgcaggcatatactttc
ccagggggctctcctgatgggattctggcaagatttactgcccctgccaaccatttctgc
atcaaccagatggtaacgacattagtagctggatctagtgacttcacaataaaacttgtt
gacatttcctctggggacaccaagaagtttgaaggacatgaggcccctgtattaagtgta
gccttagaccctaaagaagaatttctggcatcctctagttgtgatggaagtgtggtgata
tggagagttgagaataaggagaaagtgaaaaagttccaaatccttcccaaagtgggtgac
attagtttgaccaaaggattgtgtaggctatgttgggaaaagaatgggcagttcctgtat
gttcctttggagaatgagatccagatctacgacagaaattcctggtcaacaactggatca
atacaagacagtcagttttctggagtgtactctgtcctggatctctcaactgacggaaca
cacctggcggcaggatgttatgacggccatattctcatatttgacctcaaaaccaaaacc
tgtgtggataggtttaaacatgagagtggattgtccatcatgtcactatcttggaatcct
agcaaccagacagaaatagcattttgtgatagagagggacagcttggacttttgagtgaa
ataaatcttaaaggaggaaaccagcctgtaaaggaacaaagagtaaaagagactctaggg
atttttgaggatgacgatgatgacgcagaattagttcaagcttctgatgagccgagtaaa
gagcagattttcgatgaagacagcaatgactcaacaccagccagtgtcttaaagcccctt
gatgatgacttggcatcagaggatggtgaggctcctccggtcatcccagtacagaccaga
atcattgagagaccggggtttgtaccaacaccccctcaaggggccttccagccaggatcc
acccccaaacacctctctagcagattcatgatgtggaatgctgttggaattataaagcag
tttaacacagaagaagaggagtcaatagatatcgagttccacaacacggccatacaccat
gccatgcacctaacaaactcagcgggttacactatgggggacgtctcgacagaagctgtg
gtcctagccagcccaggggaggactctgacccaagtaagttgacctgcatgcattttgga
tcttgggataattctaaggagtggaccattcccatggatgatggagaagcaatagaggct
ctagcaatcggcgaggactggattgcagtagccacctcagggagactaatcagaatcttt
tctctgggaggcatccagagggatatcttctccataccaggtcctgtggtgtgcctctca
gctcacacaaaccagctgctcattgcctaccacagaggaatgggtttgccgggagaccag
tgtcttggagtacatctgatgacagtagagggagccacccagataaaccaccagccactc
cccctgtcccacaagagctcactggcttggatgggattttctgctgaaggcacacctttt
tacatggatacatctggaatagtgagaatgtgtaatagaagatttgggatgagctgggtg
caagtagcaaataccaaatcacatacaaaaggaaaatccgataattactggattgttagt
gtacacgaaaatccccaacaactacggtgtatcccttgtaagggggcccgctttcctccg
gtcctcccccgaccagctgtgggaatccttcccttccaggttcccctttgtcaaatgaac
actgaaaagagtcagtatgaggaagtatttcacagaacacagttgctaagcagccattta
cagttctggaataccattggttatgaatatgacacttcaatagctagcgaacttgctaag
ccctcacaagaagccctgatgaaactatttgctttatctgctagatcagatagagagttt
cgggctttagaggtttgtgagatgatgtcagagccacacactctgcagctagccattaaa
tatgcctgtcgcctgaaatacatgcagctggccgagaggatcagtgaggtggttcagagg
aagtccgctgaacaagcagaggaggtggaggaggaagagaaagaagtggttcatagggtt
caaagagttcacaatcaccaaaatcatgttcaggaagatgaagagatggaagaagaagat
gtggaggttgaccaggaaaatgcagaaacaaacagtgctggtgggcctttgttgaatttg
aaagccaagagcaaaaatgaggtgttatcccaatcttatgggtcttcagggaggtctaat
ccattcaaggttttaacaccccagaaaccagaaccaacaaaaggaactcaggtgtttgac
ggcatgtcaaaaaagaaacagacgagtccaggacaggtcatgctgaaaaatacgagacct
gtcaaggctgtaaagagaactcctcagagccagggaaagataacttctgtaaagtcaaca
aatgaggaagacaaacaggaagaatcacagaaaaaatctaaaagtgcttttgacctgtgg
tttgaagagacaaagtctcagctaatggaggaattgccagaagcagacgaagaaagtttg
gtacaaaccgcagctgaacgattccgaaaaattcccaaggaagaacgacagatctggatt
cagaaatcaaaagaaggagataataagaagagaaaacgagaagaggaagaaattcccaca
aggaaggtcaaccccaaactggcgggctttgccttctccaaagactaa
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