Magallana gigas (Pacific oyster): 105320389
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Entry
105320389 CDS
T03920
Name
(RefSeq) DNA polymerase delta subunit 2
KO
K02328
DNA polymerase delta subunit 2
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03030
DNA replication
crg03410
Base excision repair
crg03420
Nucleotide excision repair
crg03430
Mismatch repair
crg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105320389
03410 Base excision repair
105320389
03420 Nucleotide excision repair
105320389
03430 Mismatch repair
105320389
03440 Homologous recombination
105320389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crg03032
]
105320389
03400 DNA repair and recombination proteins [BR:
crg03400
]
105320389
DNA replication proteins [BR:
crg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
105320389
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
105320389
MMR (mismatch excision repair)
DNA polymerase delta complex
105320389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
105320389
NCBI-ProteinID:
XP_011416618
UniProt:
K1REV3
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All DBs
Position
6:12879843..12889508
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AA seq
462 aa
AA seq
DB search
MFEKKGGNHPDDLLSKPSQTHKACERQSGNFSDCSHRFLLKDKTFSRQYAHLYAERLWEV
RPKVEASARKKWGKDIVIRKLHELKSDETCVVIGTLFKHMELKPSILQEISEEHNLMPQP
VRTKYVDESDKLYLEDELQRIILMGDLDVQTSVTGVIIAVYGKEPEDDQGKFHVEKYCFQ
MLSDQVPRPVIQKDKYLVLISGLEIGSNEEQIFSLQLFVDMVAGMLGNSEEQSHCAEICR
VIVAGNSLSSSTQDKDSLQKAKYLSKKTAAGSVDAVKTLDDVFTQLASSVDVDLMPGEYD
PANYTLPQQPLHKCMFPEASRYPTFHTVTNPYDFKVEGVRFLGTSGQAVQDIVKYSTNEE
PLDILEKTLEWGHLAPTAPDTLGCYPFYKEDPFIINDCPHVLFAGNMTKFDSKVFKGCGG
QEVLLVSVPRFSQTSTAVMVNLRTQDCVPMQFAAPSTMEPNR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaaaaaagggggtaatcatcccgacgaccttttgtcaaaaccttcacagaca
cacaaagcatgtgaaagacaatcgggcaacttttcagactgctcacataggtttctactg
aaggataaaactttcagcaggcaatatgcacatttatatgcagaaagattgtgggaagta
cgtccgaaagtagaggcttctgcaagaaaaaaatggggtaaggatattgttataaggaaa
ctacatgaactcaaaagtgatgagacctgtgttgtaattgggacattgttcaaacacatg
gagctgaaaccaagcatattacaggagattagtgaagaacataatttgatgccacagcca
gttagaacaaaatatgtagatgaatcggacaaactttatttagaagacgaactacaaaga
atcattctgatgggggatctcgatgtccaaacctctgttacaggtgttataatagcagta
tatggtaaagaaccagaggacgaccaagggaagttccacgtggagaagtactgttttcaa
atgttaagtgaccaggtcccaaggccagttatacagaaagacaaatatttggtcctaata
tcgggactagaaataggcagcaatgaagagcagatctttagccttcagctgttcgttgac
atggtggcagggatgctaggtaatagtgaggaacagagtcactgcgcagagatatgtagg
gtcattgttgcagggaattcgttaagctccagtacacaagacaaggacagcttacagaag
gcaaaatatctgagcaagaaaacagcagcagggagtgtggatgctgtaaaaactctggat
gatgtcttcacacagctagcaagttctgtggatgtggatttgatgccaggggaatatgat
ccagccaattacaccctgcctcagcagccactccataaatgtatgttcccagaggcgtct
cgctacccaactttccacacggtgactaatccgtacgacttcaaagtagaaggtgtcagg
tttctgggcacctctggtcaagcggttcaggacattgtcaagtacagcaccaatgaggag
ccactggatattctggagaagacccttgagtggggccaccttgctccaactgcccccgat
actcttggatgttatccattttataaggaggaccctttcatcatcaatgactgtccacat
gttctttttgcaggaaatatgaccaagtttgattcaaaagttttcaagggatgtggggga
caggaggttctactggtcagtgttcccaggttctcccagacctccaccgctgtcatggtc
aacctccgcacacaggactgtgtccccatgcagtttgcagcaccatccacaatggaacct
aacagataa
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