KEGG   Magallana gigas (Pacific oyster): 105320389
Entry
105320389         CDS       T03920                                 
Name
(RefSeq) DNA polymerase delta subunit 2
  KO
K02328  DNA polymerase delta subunit 2
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03030  DNA replication
crg03410  Base excision repair
crg03420  Nucleotide excision repair
crg03430  Mismatch repair
crg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105320389
   03410 Base excision repair
    105320389
   03420 Nucleotide excision repair
    105320389
   03430 Mismatch repair
    105320389
   03440 Homologous recombination
    105320389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:crg03032]
    105320389
   03400 DNA repair and recombination proteins [BR:crg03400]
    105320389
DNA replication proteins [BR:crg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    105320389
DNA repair and recombination proteins [BR:crg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      105320389
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     105320389
SSDB
Motif
Pfam: DNA_pol_E_B DNA_pol_D_N
Other DBs
NCBI-GeneID: 105320389
NCBI-ProteinID: XP_011416618
UniProt: K1REV3
LinkDB
Position
6:12879843..12889508
AA seq 462 aa
MFEKKGGNHPDDLLSKPSQTHKACERQSGNFSDCSHRFLLKDKTFSRQYAHLYAERLWEV
RPKVEASARKKWGKDIVIRKLHELKSDETCVVIGTLFKHMELKPSILQEISEEHNLMPQP
VRTKYVDESDKLYLEDELQRIILMGDLDVQTSVTGVIIAVYGKEPEDDQGKFHVEKYCFQ
MLSDQVPRPVIQKDKYLVLISGLEIGSNEEQIFSLQLFVDMVAGMLGNSEEQSHCAEICR
VIVAGNSLSSSTQDKDSLQKAKYLSKKTAAGSVDAVKTLDDVFTQLASSVDVDLMPGEYD
PANYTLPQQPLHKCMFPEASRYPTFHTVTNPYDFKVEGVRFLGTSGQAVQDIVKYSTNEE
PLDILEKTLEWGHLAPTAPDTLGCYPFYKEDPFIINDCPHVLFAGNMTKFDSKVFKGCGG
QEVLLVSVPRFSQTSTAVMVNLRTQDCVPMQFAAPSTMEPNR
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgtttgagaaaaaagggggtaatcatcccgacgaccttttgtcaaaaccttcacagaca
cacaaagcatgtgaaagacaatcgggcaacttttcagactgctcacataggtttctactg
aaggataaaactttcagcaggcaatatgcacatttatatgcagaaagattgtgggaagta
cgtccgaaagtagaggcttctgcaagaaaaaaatggggtaaggatattgttataaggaaa
ctacatgaactcaaaagtgatgagacctgtgttgtaattgggacattgttcaaacacatg
gagctgaaaccaagcatattacaggagattagtgaagaacataatttgatgccacagcca
gttagaacaaaatatgtagatgaatcggacaaactttatttagaagacgaactacaaaga
atcattctgatgggggatctcgatgtccaaacctctgttacaggtgttataatagcagta
tatggtaaagaaccagaggacgaccaagggaagttccacgtggagaagtactgttttcaa
atgttaagtgaccaggtcccaaggccagttatacagaaagacaaatatttggtcctaata
tcgggactagaaataggcagcaatgaagagcagatctttagccttcagctgttcgttgac
atggtggcagggatgctaggtaatagtgaggaacagagtcactgcgcagagatatgtagg
gtcattgttgcagggaattcgttaagctccagtacacaagacaaggacagcttacagaag
gcaaaatatctgagcaagaaaacagcagcagggagtgtggatgctgtaaaaactctggat
gatgtcttcacacagctagcaagttctgtggatgtggatttgatgccaggggaatatgat
ccagccaattacaccctgcctcagcagccactccataaatgtatgttcccagaggcgtct
cgctacccaactttccacacggtgactaatccgtacgacttcaaagtagaaggtgtcagg
tttctgggcacctctggtcaagcggttcaggacattgtcaagtacagcaccaatgaggag
ccactggatattctggagaagacccttgagtggggccaccttgctccaactgcccccgat
actcttggatgttatccattttataaggaggaccctttcatcatcaatgactgtccacat
gttctttttgcaggaaatatgaccaagtttgattcaaaagttttcaagggatgtggggga
caggaggttctactggtcagtgttcccaggttctcccagacctccaccgctgtcatggtc
aacctccgcacacaggactgtgtccccatgcagtttgcagcaccatccacaatggaacct
aacagataa

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