KEGG   Magallana gigas (Pacific oyster): 105320632
Entry
105320632         CDS       T03920                                 
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    105320632
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:crg03009]
    105320632
Ribosome biogenesis [BR:crg03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    105320632
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_HPS5 Utp12 VPS11_N Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_WDR35_TULP_N Cytochrom_D1
Other DBs
NCBI-GeneID: 105320632
NCBI-ProteinID: XP_011416939
LinkDB
Position
7:complement(3341661..3356381)
AA seq 889 aa
MSSGSKIFTGYRALGFVSDHVPLATRYNKRLKENYVITSVGNAFHTYNCSKLGITQISDK
HPDSITCIAVNNRYVFTGCGNQVRAFKRSRQLVHTFDGHSVEVHLLLPFGNHLISVDIHS
NLKIWDVENGGVYLEMEFSNSTFHISALVHPSTYLNKVVLGSKQGTLQLWNILKDQMLYS
FTGWGSPITILQQSPAIDVIAVGLADGRTILHNIKYDETIMHFQQDWGPVSAISFRTDGH
PIMVTGSTAGHIALWNLEEKKLQSQIRNAHYSAVSGMNCLPSEPLMVTSAADNSLKVWIF
DLPDGGGRLLRQRSGHSAPPNVIHHYGNNGKNVLSAGQDSFLKSFSTIHDSENKSLGRAS
FNKAGTKRMGLQKDKYMMPPITAFAAEVTRASDWDSIVACHRGLSQVTTWNFQKSTMGKL
RLCHPRFEEKEFQTATAKCLDISSCGNFCVIGYSSGHVDKYNLQSGIHRGSIGDPAHHCC
VMGVVVDGMNQILVTAGLDGEIRFWGFKKHQQIDSLRTDGYISGIVLHRDSSMLAVSLDN
FQIIVVDLDTRRVVRKFQGHSNKVTGMSFSPDARWLISAGMDCTVRTWDLPSGRLVDCFM
TEMAVTSLTMSPTADFLVTCHIDSVGLYTWYNKTLLSLVSLAPLPDDYQPQEVDMPDTQV
TASVDSQTGEDNSMEDDPQDYASPEQLSAELVTLSLLPNSRWQNLLNLDVIKMRNKPKEP
PKVPKAAPFFLPTIAGLQPKFDIQDDKEEGDKKQSRSDLSRFNSLSELGRKLEEGNEGLT
ALDFLKELGPSAVDSEIRCLGPDAGGSVTVMVQFLDMISYVLDTKKDFEISNAYLGLFLK
IHGDTISSHPELVEALIQVKQKLSETWGSIQDLFTLNLTLLTHLRTAKI
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgtccagcgggagcaagatatttactggttaccgtgcactagggtttgttagtgaccat
gtcccccttgccacgcgatataacaagagactgaaggagaactatgtcataacaagcgtg
ggaaatgcttttcacacatacaactgctccaagctaggaataacacaaataagtgataaa
cacccagacagcatcacctgtatagcagtcaacaacagatatgtatttaccgggtgtgga
aaccaagtgcgagccttcaagagaagccgacagcttgttcacacctttgatggtcacagt
gttgaggttcacctgctccttccctttggaaaccatctcatttcagtggatattcacagc
aatttgaaaatctgggatgtggaaaatggcggagtgtacctggaaatggagttcagtaat
tccaccttccacatcagtgcccttgtccatcccagcacctacctgaacaaagtggttctg
ggcagcaagcagggcaccctccagctgtggaacattctgaaggaccagatgttgtactcc
ttcaccggctgggggagccccatcaccatcctccaacagtctccggccattgatgtgatt
gcagtgggactagcagatggacggacaatcctacacaatattaagtacgacgaaaccatc
atgcactttcagcaggactggggaccagtgtcggccatctcattcaggacagatggtcac
cctatcatggtgacaggaagtactgctggtcacatagctctttggaatttggaggagaaa
aagctccagagtcagatcaggaatgctcattacagtgctgtgtctgggatgaattgtctc
ccgtcggaacccctgatggttacctcagctgcagacaactcactcaaggtatggatcttt
gatttacctgatgggggaggccgtttactacgacaacgatctggtcatagcgccccgcct
aatgtcatacatcactatggaaacaacggcaaaaatgttttaagtgcaggtcaagacagt
tttttgaagtccttttccaccattcatgattcggagaacaagagtttaggaagagccagt
ttcaacaaggcagggactaagaggatggggctacagaaagacaaatacatgatgccccct
atcactgcttttgctgcagaggtcactagagccagtgactgggacagtatcgtagcctgt
catagaggcttgtctcaagtcacgacctggaacttccagaaaagcaccatgggaaaactg
cgcctatgtcatcctagatttgaagagaaagaatttcaaacagctacagcaaagtgtttg
gacattagcagctgtggaaacttttgtgtgattggttacagctcaggtcatgtggacaag
tacaacctccagtcaggtatacacaggggctccataggggatccagcccaccactgctgt
gtgatgggggtagtggtggatgggatgaaccagatactagtcacggcgggtcttgacgga
gaaatccggttctgggggttcaagaaacaccagcaaatcgacagcttacgcaccgatggt
tatatctctggaattgtgctgcacagagatagctccatgctcgctgtttccctagacaat
ttccagatcatcgtggtggatctggacactcgtcgagtggtcaggaagtttcaaggtcac
agtaacaaggtcactgggatgtccttcagccctgacgctcgatggctgatctctgctggc
atggactgtacagtgaggacctgggatctaccgtcaggaaggttggtggactgttttatg
acagagatggcagtaacctctctgacaatgtctcctaccgcagacttcctggtgacctgc
cacatcgacagcgtaggtctctacacctggtacaacaagacgcttctctctcttgtctct
ctcgctcctctccccgatgattatcaaccacaggaagttgacatgccggatacgcaagtc
acggcctcagtagacagccagacaggagaagacaactctatggaggatgatcctcaggat
tatgcctcgcctgaacagctgtctgcagagttagtgaccttgtcacttctccccaactcc
cgctggcagaacctgctcaatctggacgtcatcaagatgagaaataaacccaaagaacct
cctaaagtccccaaagctgcaccatttttcctacccactattgccggcctacagccaaag
tttgatatccaagacgacaaggaagaaggggacaagaagcaatcacgttctgatctctca
agatttaattcactcagcgagcttggacgcaaactagaggagggcaacgaaggcctgact
gccctggatttcctgaaggagctgggtccatctgcggtggacagcgagattcggtgtctg
gggcctgatgcagggggatcagtgaccgttatggtccagttcctggacatgatcagttat
gtcttggacacaaagaaagactttgagatcagcaatgcatacctgggactgttcttgaag
attcatggagatacgatatctagccatccggaactagtggaggctctcatacaggtgaaa
cagaaactgagtgaaacttggggctccatacaggacttatttactttaaatctgacactt
ctcacccacttaaggactgccaagatctga

DBGET integrated database retrieval system