Magallana gigas (Pacific oyster): 105320632
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Entry
105320632 CDS
T03920
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105320632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105320632
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105320632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_HPS5
Utp12
VPS11_N
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
105320632
NCBI-ProteinID:
XP_011416939
LinkDB
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Position
7:complement(3341661..3356381)
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AA seq
889 aa
AA seq
DB search
MSSGSKIFTGYRALGFVSDHVPLATRYNKRLKENYVITSVGNAFHTYNCSKLGITQISDK
HPDSITCIAVNNRYVFTGCGNQVRAFKRSRQLVHTFDGHSVEVHLLLPFGNHLISVDIHS
NLKIWDVENGGVYLEMEFSNSTFHISALVHPSTYLNKVVLGSKQGTLQLWNILKDQMLYS
FTGWGSPITILQQSPAIDVIAVGLADGRTILHNIKYDETIMHFQQDWGPVSAISFRTDGH
PIMVTGSTAGHIALWNLEEKKLQSQIRNAHYSAVSGMNCLPSEPLMVTSAADNSLKVWIF
DLPDGGGRLLRQRSGHSAPPNVIHHYGNNGKNVLSAGQDSFLKSFSTIHDSENKSLGRAS
FNKAGTKRMGLQKDKYMMPPITAFAAEVTRASDWDSIVACHRGLSQVTTWNFQKSTMGKL
RLCHPRFEEKEFQTATAKCLDISSCGNFCVIGYSSGHVDKYNLQSGIHRGSIGDPAHHCC
VMGVVVDGMNQILVTAGLDGEIRFWGFKKHQQIDSLRTDGYISGIVLHRDSSMLAVSLDN
FQIIVVDLDTRRVVRKFQGHSNKVTGMSFSPDARWLISAGMDCTVRTWDLPSGRLVDCFM
TEMAVTSLTMSPTADFLVTCHIDSVGLYTWYNKTLLSLVSLAPLPDDYQPQEVDMPDTQV
TASVDSQTGEDNSMEDDPQDYASPEQLSAELVTLSLLPNSRWQNLLNLDVIKMRNKPKEP
PKVPKAAPFFLPTIAGLQPKFDIQDDKEEGDKKQSRSDLSRFNSLSELGRKLEEGNEGLT
ALDFLKELGPSAVDSEIRCLGPDAGGSVTVMVQFLDMISYVLDTKKDFEISNAYLGLFLK
IHGDTISSHPELVEALIQVKQKLSETWGSIQDLFTLNLTLLTHLRTAKI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgggagcaagatatttactggttaccgtgcactagggtttgttagtgaccat
gtcccccttgccacgcgatataacaagagactgaaggagaactatgtcataacaagcgtg
ggaaatgcttttcacacatacaactgctccaagctaggaataacacaaataagtgataaa
cacccagacagcatcacctgtatagcagtcaacaacagatatgtatttaccgggtgtgga
aaccaagtgcgagccttcaagagaagccgacagcttgttcacacctttgatggtcacagt
gttgaggttcacctgctccttccctttggaaaccatctcatttcagtggatattcacagc
aatttgaaaatctgggatgtggaaaatggcggagtgtacctggaaatggagttcagtaat
tccaccttccacatcagtgcccttgtccatcccagcacctacctgaacaaagtggttctg
ggcagcaagcagggcaccctccagctgtggaacattctgaaggaccagatgttgtactcc
ttcaccggctgggggagccccatcaccatcctccaacagtctccggccattgatgtgatt
gcagtgggactagcagatggacggacaatcctacacaatattaagtacgacgaaaccatc
atgcactttcagcaggactggggaccagtgtcggccatctcattcaggacagatggtcac
cctatcatggtgacaggaagtactgctggtcacatagctctttggaatttggaggagaaa
aagctccagagtcagatcaggaatgctcattacagtgctgtgtctgggatgaattgtctc
ccgtcggaacccctgatggttacctcagctgcagacaactcactcaaggtatggatcttt
gatttacctgatgggggaggccgtttactacgacaacgatctggtcatagcgccccgcct
aatgtcatacatcactatggaaacaacggcaaaaatgttttaagtgcaggtcaagacagt
tttttgaagtccttttccaccattcatgattcggagaacaagagtttaggaagagccagt
ttcaacaaggcagggactaagaggatggggctacagaaagacaaatacatgatgccccct
atcactgcttttgctgcagaggtcactagagccagtgactgggacagtatcgtagcctgt
catagaggcttgtctcaagtcacgacctggaacttccagaaaagcaccatgggaaaactg
cgcctatgtcatcctagatttgaagagaaagaatttcaaacagctacagcaaagtgtttg
gacattagcagctgtggaaacttttgtgtgattggttacagctcaggtcatgtggacaag
tacaacctccagtcaggtatacacaggggctccataggggatccagcccaccactgctgt
gtgatgggggtagtggtggatgggatgaaccagatactagtcacggcgggtcttgacgga
gaaatccggttctgggggttcaagaaacaccagcaaatcgacagcttacgcaccgatggt
tatatctctggaattgtgctgcacagagatagctccatgctcgctgtttccctagacaat
ttccagatcatcgtggtggatctggacactcgtcgagtggtcaggaagtttcaaggtcac
agtaacaaggtcactgggatgtccttcagccctgacgctcgatggctgatctctgctggc
atggactgtacagtgaggacctgggatctaccgtcaggaaggttggtggactgttttatg
acagagatggcagtaacctctctgacaatgtctcctaccgcagacttcctggtgacctgc
cacatcgacagcgtaggtctctacacctggtacaacaagacgcttctctctcttgtctct
ctcgctcctctccccgatgattatcaaccacaggaagttgacatgccggatacgcaagtc
acggcctcagtagacagccagacaggagaagacaactctatggaggatgatcctcaggat
tatgcctcgcctgaacagctgtctgcagagttagtgaccttgtcacttctccccaactcc
cgctggcagaacctgctcaatctggacgtcatcaagatgagaaataaacccaaagaacct
cctaaagtccccaaagctgcaccatttttcctacccactattgccggcctacagccaaag
tttgatatccaagacgacaaggaagaaggggacaagaagcaatcacgttctgatctctca
agatttaattcactcagcgagcttggacgcaaactagaggagggcaacgaaggcctgact
gccctggatttcctgaaggagctgggtccatctgcggtggacagcgagattcggtgtctg
gggcctgatgcagggggatcagtgaccgttatggtccagttcctggacatgatcagttat
gtcttggacacaaagaaagactttgagatcagcaatgcatacctgggactgttcttgaag
attcatggagatacgatatctagccatccggaactagtggaggctctcatacaggtgaaa
cagaaactgagtgaaacttggggctccatacaggacttatttactttaaatctgacactt
ctcacccacttaaggactgccaagatctga
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