Magallana gigas (Pacific oyster): 105320707
Help
Entry
105320707 CDS
T03920
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105320707
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105320707
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105320707
03036 Chromosome and associated proteins [BR:
crg03036
]
105320707
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105320707
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105320707
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105320707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
105320707
NCBI-ProteinID:
XP_011417060
UniProt:
K1QPJ9
LinkDB
All DBs
Position
8:15888621..15895540
Genome browser
AA seq
445 aa
AA seq
DB search
MAGNVGDIQWCFSQVKGAIETEDVTEADIISCVEFNSTGDLLATGDKGGRVVIFQRDKAG
KIAIPSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLKRTNPANFLLSTNDKTIKL
WKVTERDKRPEGYNLKDESGLMRDPTNVTSLRVPSFKPMELMVEASPRRIFANAHTYHIN
SISVNSDQETYLSADDLRINLWHLEVTDQSFNIVDIKPANMEELTEVITAAEFHPHECNL
FVYSSSKGTIRLCDMREQALCDKHAKLFEEPEDPTNRSFFSEIISSISDVKFSHNGRYMV
TRDYLSIKVWDLLMETKPIETYQVHEYLRSKLCSLYENDCIFDKFECSWSGDDRHIMTGS
YNNFYRMFDREAKRDTTLEACRENMKPRTILKPRKVCTGGKRKKEEINVDCLDFNKKILH
TAWHPLENILAVAATNNLYIFQSKD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaatgttggagacatccagtggtgcttttcgcaagtaaagggcgccatagaa
actgaggatgtcactgaagctgacataatttcctgtgtggagtttaacagcacaggtgac
ctacttgcaacaggagacaaggggggacgtgttgtcatctttcagcgagataaagctgga
aagattgccataccatcaagaggagaatataatgtgtacagcacatttcaaagtcatgag
ccagagtttgactacctcaaaagtttggagattgaagagaagatcaacaaaataagatgg
ctgaagcgaacaaatcctgccaatttcttgctttccacaaatgataagaccatcaagttg
tggaaggtcactgagagagacaagagacctgaaggttacaatctgaaggatgagtccggg
ttaatgagagaccccaccaacgtgacaagcttgagggttcctagctttaaacccatggag
ttaatggtggaggcaagtccccgtcgtatatttgccaatgcccacacttaccacatcaac
tcaatctctgtcaacagtgaccaagaaacatatctgtcagctgatgaccttcgcattaac
ctttggcatttggaggtcacagaccaaagcttcaatattgtggacataaagcctgccaac
atggaggagctaactgaagtgatcactgctgctgaatttcatccacatgaatgcaatctg
tttgtgtacagcagcagcaaaggcactattaggctctgtgatatgagagagcaggcatta
tgtgataaacatgccaaattgtttgaggaaccagaagatcccaccaataggagtttcttt
tctgagattatatctagtatatctgacgtaaagtttagtcataatggacgttacatggtg
actcgcgactacctgtccatcaaagtctgggacttattgatggagaccaaacccatagaa
acttatcaagtacacgagtacctcaggagtaaattatgttctctgtatgaaaatgactgt
atttttgacaaattcgagtgttcatggagtggagatgacaggcacattatgactggctct
tacaataatttctatcggatgttcgaccgtgaagccaaaagggacacaactttggaagca
tgtagagaaaacatgaaaccaaggacaattctaaaaccgcgtaaagtgtgcactggtggt
aagaggaaaaaggaagagattaatgtggactgtctagacttcaataaaaagattctacac
acagcctggcaccccctagaaaacatcctggctgtggcagccaccaataatctatatatc
ttccaaagtaaagattaa
DBGET
integrated database retrieval system
