Magallana gigas (Pacific oyster): 105321021
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Entry
105321021 CDS
T03920
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03013
Nucleocytoplasmic transport
crg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105321021
03015 mRNA surveillance pathway
105321021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105321021
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105321021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
Nup35_RRM_2
RRM_3
RRM_occluded
RRM_7
RAP1
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
105321021
NCBI-ProteinID:
XP_065922021
LinkDB
All DBs
Position
7:26957037..26962266
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AA seq
256 aa
AA seq
DB search
MVRSQSKSRERKKSGSERGRERKRKNSSSSGSGSSSSSRSRSRSGSSSSSSSSSGSSNSS
SSRSGSSSSSRSSSSASEKGRGGKASKRQQSDSPKRRKKSPEPKPTKVHVGKLTRNVNKD
HIMEIFSNYGSVKNIDMPMDRVHSNFSKLFAYIEYESPEEAEKAVKYMDGGQIDGQEISA
SAVLAARPVRAPQRRSPPRRGPPARWGRPASPRYRDRRRTPPPRRRSPPPRRRSRSRSRS
PAKRRRYSRSSSSSSR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggtccgaagtcaaagcaaaagtagggaaaggaagaagagcggatcagagcggggtagg
gagagaaagaggaaaaattcctctagcagtggatctgggtcctctagttcttcacgttcc
cgaagtagatctgggtcctcttcctccagcagcagttccagtggaagttccaacagcagc
tcctctaggtctggaagttccagttctagtcgttcgtcttcaagtgcaagtgagaagggg
cggggagggaaagcctccaaaaggcagcagtcagattctccaaagagaagaaagaagagt
ccagagccaaagccaacaaaagttcacgttgggaagctgactcggaatgtaaacaaggat
cacattatggagatattctccaactatggcagcgtaaagaacatagatatgccgatggac
agagtgcattcaaactttagtaaattatttgcatatattgagtatgaatcgcctgaggaa
gcggagaaggctgtgaagtatatggatggaggacaaattgatggacaagaaatatcagca
agtgcagtgctggcagctagacctgtacgggcacctcaacgtcggagtccaccccgcaga
gggccaccagctagatggggacgacctgcctcgccacgatacagagacaggcgaaggaca
ccccctccaagaagaagaagccccccacccagaagacgctccagatcaaggtcgcggtcc
cctgccaagaggcggcgatacagccggtcaagctcgagttcatcacgttga
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integrated database retrieval system
