Magallana gigas (Pacific oyster): 105321080
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Entry
105321080 CDS
T03920
Name
(RefSeq) nuclear receptor ROR-beta isoform X3
KO
K08701
nuclear receptor subfamily 1 group D member 3
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105321080
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105321080
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105321080
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1D. Rev-Erb
105321080
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105321080
NCBI-ProteinID:
XP_034306943
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Position
4:complement(515113..565014)
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AA seq
718 aa
AA seq
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MCFYSNCSRLPPLGLDMDVHSSVVPSSASAHDLQHKAMMSFNSGNSMHGNDPGMSIPSSV
TGGNSGPDHNPTVTSSNMGSLPMSLVKNSVKAPTCKVCGDESSGFHYGVDSCEGCKGFFR
RCITQGMTHKCSNEEKCEITPFTRNSCQYCRLKKCFAVGMSREASRLGRRPKRLKDPSSD
ARGHGGNLPIAPYPTSPQELQRMRMADLQKVLQQNGTFKAELMQAFLQAAQVSFREHQRN
PSNGQQPPQQQRPQQHGPPHQMTTQMSTGEVNGNVNGHDSGYSSFSSPVSSKSQSPITND
NLGEKFNGNQPMAVSTGDMMLEEIDNLTMNIKSEPGSNFSNCSSLDSSTDLLAQMDLKVL
NQMNEKMFMDPSTLLFESSFSPPEATCKLEPDSPSVTDVMSMGRMNPDCNISDQNSCTGS
SSSAGKELCLDIDEEEIVETDATKLLEEVRQGPTDVRRALIEQVTESVVEAHFQTCNPTY
QNVAEANDRFAEKMASGDLPDFSKLVINPNSIWQQFVSQMVPEITLVVKFCKKIPGFGEI
DQEDQINLIKQGSFEVMLCRFCNLVDYKKGMMFDPEMKIKCPRSMVKMLPMGEFMDEFFN
VAEMFNPLKLTDGEIGLFTSTLIICPERKGIKNVRAVRKLQSLLFQCLYALIKKNHFDYD
NVFMKAVSTMRTFKVVNLKHRIALNSMQMQAPSKDMFPPLHCEVFEHGECSTENSKKS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttttattcaaactgcagcagattacctcccctgggcttggatatggatgtccat
tcttctgtggttccgtcctctgccagtgcccacgaccttcaacacaaggccatgatgtcc
ttcaactcgggaaactccatgcacgggaacgacccgggaatgtccatccccagcagtgtg
accggagggaactccggcccagaccacaaccccaccgtgacatccagcaacatggggtca
ctgcccatgtcactcgtcaagaactcagtcaaagccccgacctgtaaggtgtgcggggac
gaatcctcagggttccactacggagtggactcgtgtgaaggatgcaagggttttttccgc
cgctgtatcacccaaggaatgacacacaaatgttctaatgaggagaaatgtgaaatcacg
ccgttcaccagaaacagttgtcagtactgtcgactcaaaaaatgcttcgcagtcggaatg
tctcgggaagcatccagactgggtagaaggccaaagaggttaaaagacccgtccagtgat
gcgaggggccatggaggaaatctacccattgccccctaccccacctccccacaggaatta
cagaggatgcgcatggcggatctacagaaggtgttacagcagaacggcacgttcaaggcg
gagctaatgcaggccttccttcaggcggcccaggtcagcttcagggaacaccagcgtaac
cctagcaacggccagcagccacctcagcaacagcgaccccagcaacacgggccacctcac
cagatgactacgcagatgagtactggagaggttaacggtaacgtgaacggccacgactcc
gggtactccagcttcagtagtccggtcagcagtaagagtcagtccccgatcaccaacgac
aacctgggcgagaaattcaacgggaatcagccaatggcggtgtcgacgggagacatgatg
ctggaggagatcgacaacctgaccatgaacatcaagtcggagcccgggagcaacttctcc
aactgcagcagcctagatagcagcacggacctgctggctcagatggacctcaaagtgttg
aatcaaatgaatgaaaaaatgttcatggacccttccactctcctgtttgagagtagcttc
tctccccccgaggccacatgtaaactggagccggacagtccaagtgtgacggacgttatg
tccatggggagaatgaatccggactgcaatatttccgaccagaacagttgcactggtagt
tctagtagtgcgggaaaagagttatgcttggatatcgacgaagaggaaatcgtggagaca
gacgccacaaaattactagaggaggtgcggcagggtccgacggatgtccgccgcgcgctg
atagagcaggtgacggagagcgtggtggaagcccactttcagacctgtaaccccacatat
caaaacgttgcagaagccaacgacagattcgctgaaaaaatggcctccggtgatttgcct
gacttcagtaagctggtgatcaacccaaactctatctggcaacagttcgtctcccaaatg
gttcctgaaatcacactggtcgtcaagttctgcaagaagattccaggtttcggggagata
gaccaggaagaccagattaacctaatcaagcaggggtcgtttgaggtcatgctgtgccga
ttctgtaacttggtggattacaagaaggggatgatgtttgacccagaaatgaaaataaaa
tgtcccaggtccatggtgaagatgcttccgatgggagaattcatggacgagttcttcaat
gttgctgagatgtttaaccccctgaaactgacggatggggaaatcggcctcttcacatct
accctcatcatatgtccagagcggaaaggcatcaagaatgtgagagctgtacgtaaactc
cagtctctgcttttccagtgtttgtacgcactcatcaagaagaaccactttgattacgac
aatgttttcatgaaggcagtgtccacaatgaggactttcaaagtggttaatctgaagcat
cgcatcgccctcaacagcatgcagatgcaggcgccctcaaaagacatgtttcctccacta
cactgtgaggtgttcgaacacggagagtgtagcacggagaactcgaaaaaatcatga
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