Crassostrea gigas (Pacific oyster): 105321190
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Entry
105321190 CDS
T03920
Name
(RefSeq) extensin
KO
K25780
kelch domain-containing protein 4
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105321190
Spliceosome [BR:
crg03041
]
Complex B
Other components
Prp19-related factors
105321190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
Motif
Other DBs
NCBI-GeneID:
105321190
NCBI-ProteinID:
XP_034324098
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Position
LG3:46733309..46744078
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AA seq
963 aa
AA seq
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MAYESIRVSRWSDDHDHKSSLEAAAEAAAKVNAMLIAKGKLKPSQLSQQQGIKPKSTSQP
GGLIVAEVEINDVPIGCRNMLTRGATQEEISKLSGSAVSTRGRYLSPEEKMGNLGDRPLY
LCVQGSSQESVDIAVGRINEIILNGMKAKGSRFAPITRPMVPLQRPMLNQPPPLMSLETQ
PPQIPTGVPVLQEKLYIGLEHAPPNFDVKNKIFGPMGSFLNHIQAETGAKVTLRGKASGF
IEPMSGREAFEPMHVHIQHGTLLGLQNAKQLAENLIQTVQQDYAQFQQALVALPPNLSPA
TAAIIAGLQQSAPGGILSQQTISALSGGTQGIPLQPQPGLQPLTTIPAINQPVMTNVVFS
SSPVLTSHNQVCSTLAGGPPQQVIVQAQVPPPPHGIPHLGHPHLISTNPPPASSPQPLMT
TVQPELVPTSLPVWGSSAPGAMPTQQIIQQIPMSVGPPVSSYGPPISSAYMPMSSSLGPV
TCTYTQVTTVPLLRVSSPVTVTSSTPTPYNYGGPLKEENKRRFTEEKPDDKVPENLLGYE
HGPPHLTNLVVQGPPPAQSQSPSQGQLVQGPVTHVIQALPPTQIIHGPPPTQIVQGPPPG
YQAPPPHLIHGPPPHGQIPAPYHLGPPPVVSDGVPVMSHSTQPPQGAPVYSVHTSISEEG
RVTHTYTVQSNSGGLATPPQDAPGDVDKKLMPPPALPTGVKRPASEALPESPDRKSKKDS
DDEDEEVKSSLRQQHKEAKKYQYNQYSSTPQLYGQPPPPEQLSPSGQYEQGQQPPPQFLP
PGQVVTIAQHTDTPPGSENLAQPGLQQQIIIQQPQQLPSHPPPAFQQPMFTGQISHSPPP
PPPWTTDQPPVSGPSPGPAQQLIPQQITLASPHRVNPPDQRLMPEEHRIYGEALPPPPPN
YQTGPPPHGSTPQIIVPSHLPPPTQTIVSVPQFNGQPPPFPGQPPPQGSYQYPTGPPLTM
SYW
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatgaaagcattcgtgtcagtagatggagtgatgaccatgatcataaaagtagc
ctagaagctgcagctgaggcggcagccaaagtcaacgccatgcttatagcaaagggaaag
ctcaagccatcacaactctcacaacaacagggcatcaagccaaagagtacttcacagcca
ggaggcttaattgtagctgaggtagaaataaatgatgttccaatcggctgcagaaatatg
ttgacaagaggggccacacaagaagagatttcaaaattgagtggttcagctgtttcaaca
agaggtcgatatttatcacctgaagagaagatgggaaacttaggtgaccgaccactttac
ctctgcgtgcagggatcttcccaagagtctgtagacattgctgtcgggagaattaatgaa
atcatactgaatggaatgaaggctaaaggatcaagattcgctcccatcacaagacccatg
gttccattgcagagacccatgctgaatcaacctccacccctcatgtcattggagactcag
cctcctcaaattcccactggggtacctgttctacaagaaaaattatatataggattggaa
catgcacctccaaattttgatgtcaaaaataaaatatttggaccaatgggttccttctta
aaccacatacaggcagaaactggagccaaagtaactttacgggggaaagcttcaggattt
atagaacccatgtcagggagagaggcgttcgaacccatgcatgtccatatccaacatggc
actttactcggtcttcagaatgccaagcagcttgcagaaaacctaattcaaacagttcag
caagattatgcccagttccagcaagctttggtcgctctgccacccaatctctcccctgct
acagctgccataatagcaggtctgcagcagagtgccccaggagggatcctcagccagcaa
acgatcagtgccctgtcaggtgggactcaagggataccactgcagccacaaccagggttg
cagcctctgacaacgattcctgctatcaatcaaccggtgatgacaaatgtggtcttctcc
tctagtcctgttctcacgtctcacaaccaagtttgttctactctagccggtggccctcct
cagcaggtcatagtacaggcacaggttccccctccccctcacggaattccacatctaggg
catccccatttgatatcgaccaaccctccccctgccagcagtccccagcccctgatgaca
acggtgcagcccgagttagttcccacctctctcccggtgtggggatcatcagcccctggg
gcaatgcccactcagcaaattatacaacagattccaatgagtgtcggcccgccagtcagt
agttatgggcccccaatctctagtgcctacatgcctatgtcttcttcgctgggaccagtg
acttgcacatacacgcaggtcaccactgtccctctgctgagggtgtcctcaccggtgacc
gtcacttcctccacccccaccccttacaattacgggggtcctttgaaggaagaaaacaaa
cggagatttacagaggagaaacctgacgataaagtgccagaaaacttgcttggttatgag
catggtccacctcatctaacaaacttggtggtacagggaccaccccctgcacagtctcag
tctccatcccagggacagcttgttcagggaccagtcacacacgtcattcaggccttaccc
cccacacagatcatccatggtcccccacccacccagattgtacagggtccacctccaggc
taccaagcccctccccctcatctcatacacggaccaccgcctcacggccagattccagcc
ccatatcatctaggaccacccccagtggtatccgatggagtacctgtcatgtcccacagt
actcagcccccgcaaggtgcccccgtgtattctgtccatacttctatctctgaggaggga
agagtgacccacacatacacagtgcagtccaactctggtggattggcgacccctccccaa
gacgcacccggtgatgtggacaagaaactcatgccaccccctgctctaccaacaggggta
aagcggccagcatctgaggcacttccagagtcaccagacaggaaaagtaaaaaagatagc
gatgatgaagatgaggaagtaaagtcatccttgagacaacaacataaggaggccaagaaa
taccaatacaaccagtactccagtaccccccagttatatggtcagcctccacctccagaa
cagctgtctccctcaggacagtatgaacagggccagcagccgcccccacagttcttaccc
ccagggcaagttgtgacaatagcccaacacacagacactcccccggggtcagagaacctg
gcccagccaggactacaacaacagataattatccagcagccacagcaactgcctagccat
cctccccctgccttccaacaacccatgttcacaggacaaatctctcacagcccaccccct
cccccaccctggaccacagaccaaccccctgtgtcaggaccaagtcctggcccagcccag
caattgatcccccagcagattacactggcctcaccccacagagtcaaccctccggaccag
agactgatgccggaggaacatagaatctatggcgaggccctgcccccacctcctccaaac
tatcagacaggcccacctccacatggatccactcctcagattattgtcccctctcatcta
ccccctcccacacagacaatagtgtcagtaccccaattcaatggacagcctcccccattc
cctggtcaaccccctccccaggggagttaccagtaccccactggtccccctcttaccatg
tcttactggtga
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