Magallana gigas (Pacific oyster): 105321354
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Entry
105321354 CDS
T03920
Name
(RefSeq) anaphase-promoting complex subunit 1 isoform X1
KO
K03348
anaphase-promoting complex subunit 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105321354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105321354
03036 Chromosome and associated proteins [BR:
crg03036
]
105321354
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
105321354
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
105321354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apc1_MidN
APC1_3rd
APC1_C
ANAPC1
Motif
Other DBs
NCBI-GeneID:
105321354
NCBI-ProteinID:
XP_065942883
LinkDB
All DBs
Position
6:complement(28881237..28982378)
Genome browser
AA seq
1942 aa
AA seq
DB search
MISACETQEFVPFGRRYIENHPGIFQIQVQNHVSTEQGIPLVKSFRDISITDPKKPKEHW
MFKKQCKDFSKENEHCDEELYVSGNTVIWSHGGQSGIQQVLKTFTMDTPVLQALWFDFIL
PNTEIVPDPPSSLDIEGDLQTGICVVELGCVSCYCQSGKEYSMALPFQIASVWKMKNGLL
FERAVSMAESSNSKRNFPNQTTVFSMLHCLDEVSPVITRTNTSSGLKVSYMTDTSQHIVY
TSVEPSLALIYDSQLGVHSAWRIQRAKIDDCSLVCGTMDNSLYHPAPGTPLNNQSSCSSR
YFGNLSSQSPSVSPLRNFSGRISSPGCLYLPQPISPMISSIAASRSQSPAVTSGSLHRFH
TPSPNLGRHSGNYFRTPPVCSSNVSLINESFTEWVEPLRPEVCLEHLWTEPAPAIRDGSL
GKSAKVFQMRDLCGQQYLCYLITYRQQLRCVKFEESNDLSQLIFGSVSIIPAKDALPIES
LNLLVVLDPNGVLFIYSGVTKLNRLHVSTLPLGSGSLSMLKPVTPMSSPQRGGIFTSSRP
PSAMDQAGFDEEITRLSPVQTDLEDSSHFDEFQAHSSYIQGLRDNVGKRFTIELINGSMV
RAVMPKASLSPGIEKSLQSLRHMLPKDIAISVLGKWYTTRNAPGGLGNQSEWTLFTKTLF
GLMGYDTSRLALTSQEDLDISASPAIVAKKPKQSDQGSEVDWEALIGSDHHKFIKSSIEC
CFGLDCSSTSVPASKHSFPSSINTSSLLFVHIPAVFAALHLTFEELLLSTTLVEEVENLV
PSLYQLAVDLRKTNYADYYCRKFPSLYNSCSDEPSQITEEHLIKLQYPGMVFDQVVSVDH
WVNAALKEQECFPFPYIPGVCNLTKSIISLYAVLVKQNMTTEQAVDRCLRRLAPAGHRGP
ITDLSLSRSFSVTVPTTSVQERMVLFMTDLGMTLEELECLPVGLSLPFREAIFHCRYNPP
SDWPEEPYVLIGRQDLAKLLSMGKKKNVCPPGIYTSKPYTGTEGTQYEEDGMEHLDQELL
RLRFSEDLRVSEARRLLQSSRPARIALTQRPEVSDHDFIEEQERHLYNICIRTMALPVGR
GMFTLCTYHPLPTEPLPIPKLCLQGRAPPRNATVDLTHIDTPANMSSWPQFHNGVAAGLR
MADFSHIDSTWILYNKPKGNELTNEYAGFLMALGLNEHLIHLHSLNVHDYLSKGSEMTTV
GLLLGLAAAKRGTMDFATTRILSIHVAAFLPPTSTELNVPHNVQVAAILGVGLVYQGTAH
RHTSEVLLSEIGRPPGPELDNCTDRESYSLAAGLALGLVMFGKGNEVIGTSDLGMADTLC
HFMTGGHKRPLIGSNKERYKAPSYQIKEGDNINVDVTSPGATLALGMLYFRTNNSAVIDW
LRVPDTQFMLDQVRPDFLMLRTISRGLVSWDFVVPSFEWIKSMIPQILQEKAFERKQGEE
DDVMIDYETMSQSYCNVVAGGCLVIGLKFAGTANQMAFGTLMKSIKLALTIMSSQSHVEQ
TGRGVLENCMVTILLSLAMVMAGSGNLEVLRLCRMLRARIGPPHNIFVTYGSHMAISMSV
GLLFLGGGRYSLSTTPEAIGIMLCAFFPKFPFHSNDNRYHLQAFRHLYVLATEARVVLPR
DVDSGEPCYVPLEIRFKDTADYCGEVFRTSAPTLLPELDKIEEVKILGPRYWPITFHIDK
NWSTLNLLLKKNGILFVKQRAGYLSYVLDPKICLPKLPKTYMKGYRSVLAKSLTSDHSSH
TSVKPDVIKAFTTDPVISSMADYFLMGKDDCQRNRTLQKLSSILYSCVTQEKPEVISTHL
RLDQVLNQSNFSLTHLGIRQLKNILAYYNSPFNLGKLENVSSTQLLQMEFLLALKSQLED
RLDRWQAANMEGIVKYLQTNVVESCDLVLLSAYVTWYNIPTPEEISKIIVEGGPTLPVLC
STLPHLPVNTVMQILAAWQAAV
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atgatatcagcctgtgaaacacaggagtttgtaccttttgggaggagatacattgaaaat
catccaggaatatttcaaatacaagtacagaaccatgttagcacagagcaagggatacct
ttggtcaaatcctttagagatatatccatcacagatcctaaaaaaccaaaagaacattgg
atgttcaaaaagcagtgtaaagatttctccaaggagaatgaacattgtgatgaagaactg
tatgtaagtggaaacactgttatttggagtcatggaggacaaagtggaatacagcaggtt
ctcaaaacctttaccatggatacacccgttttacaggccttatggtttgattttattttg
cctaacacagagattgttccagacccacctagttcactggacattgagggcgatcttcag
acaggaatctgtgtggtagaattaggctgtgttagttgttactgccagtctggaaaagaa
tattccatggcattaccatttcagattgcaagtgtttggaaaatgaagaatggtcttcta
tttgagagagcagtatccatggcagaatcaagtaacagtaaaagaaatttcccaaatcaa
accacagtatttagtatgttacactgtttggatgaagtttcaccagtgataacgagaaca
aacacaagcagtggattaaaagtctcatatatgacagatacctcacaacatattgtatat
acaagtgtcgagccatctttagccctgatatatgactcacaactaggagtacattcagct
tggagaattcagagagcaaagatagatgactgtagcttggtttgtgggactatggataac
agtctgtatcaccctgctcctggaacacccctcaacaaccagtccagttgtagttctcgc
tactttggaaacctgtcatctcaatctcctagtgtatctccacttcgaaacttctcagga
aggataagctcaccaggttgtctttatcttccccaacctatcagtccaatgatttccagc
attgcagcatctaggtctcagtcccccgcagtaacaagtggttctcttcaccgtttccat
acaccatctccaaacctcggtagacactcgggaaactactttcgaactccacctgtctgc
tccagtaacgtgtccctcatcaatgagagcttcacagaatgggtagaacctttaaggcct
gaggtatgcttggagcacctgtggacagaacctgcgccagcaatcagagatggatctcta
ggaaaatctgcaaaagttttccagatgagggacttgtgtggacaacagtacttatgttac
ctgataacatatagacaacaactaaggtgtgtaaaatttgaggagagcaacgatttgagt
cagttaatatttggatctgtatcaatcattccagccaaagatgccttgccaatagagagt
ttgaatctgttggtggtacttgatcccaatggagtgttgtttatttacagtggagtaact
aagttgaaccgactacatgtttcaacactcccccttgggtctggctctttgagtatgctg
aagcctgtgacacccatgagtagccctcagaggggaggcatctttacctccagtagacct
cctagtgccatggatcaagctggctttgatgaggaaattactagactttcccccgtccaa
accgatttagaagattcctcacactttgacgagtttcaagctcattctagctacatacaa
ggtctaagagacaatgttggtaaaagattcactattgaactcattaatggcagtatggtt
cgggcagtaatgccaaaagcttcactatcacctggcattgaaaagagtttacaatcccta
agacatatgttgccaaaagatatcgccattagtgtgcttggtaaatggtacaccaccagg
aatgccccaggaggactaggaaaccagtcagagtggactctgttcacaaaaactttgttt
ggactaatgggatatgacacctctagactagctttgaccagtcaggaggatctagacatc
tcagcctcgcctgctattgttgccaagaaaccaaagcagtctgaccaggggtcggaagtt
gattgggaagcactgattggttccgaccatcacaagttcatcaaatcgtctattgagtgc
tgttttggattagactgctccagcacgtctgtgccggcctccaagcactccttcccatca
tcaatcaacaccagctctctgctatttgtacacataccagctgtgtttgcagcattacat
cttacatttgaggagttgctgttaagtacaactctagtagaagaggttgaaaatctggtg
cctagcctttatcaactagcagtagatttaaggaaaacaaattatgcagattactactgt
agaaagtttccatctttatataacagctgtagtgatgagccaagtcagatcacagaagag
catctgatcaagctgcagtatccagggatggtgtttgaccaggtggtgtcggtggatcac
tgggttaatgcagccttaaaagaacaagaatgtttcccatttccatacattcctggtgtt
tgtaatctcacaaagagcattatttcattgtatgctgtactagtcaagcagaacatgaca
acagagcaagctgtggatcgctgtttaagaagattggcacctgcaggtcacaggggtcca
attacagatttgtctctgtccagaagcttctctgtgactgttccaactaccagtgtacag
gaaagaatggttttattcatgacagatttgggtatgactttggaagaattggaatgttta
ccagtaggtttatcattaccctttagagaagccatttttcactgcagatataacccacca
tcagattggcctgaagagccctatgttctaataggacgccaggatttagcaaaacttttg
tccatgggcaaaaaaaagaatgtttgtcctccaggtatatatacctccaaaccctacaca
gggacggaaggcacgcagtatgaggaggatggcatggaacatctagatcaagagctgctt
agattgagattttctgaagatctgcgagtgtccgaagcacggcgtctccttcagtcctcc
cgtccagccagaatagctctcactcaaaggccagaggtcagtgatcatgatttcattgaa
gaacaagagcgccatttatacaacatttgcatcagaactatggccctccctgttggaaga
ggaatgtttacattgtgtacctatcatcctctccccacggagccactgcccattcctaag
ctctgtctacagggaagggcaccaccaagaaatgctacggttgatttaacacacatagat
acccctgccaacatgagttcatggccacagtttcacaatggagtagctgctggactaaga
atggcagacttttctcatattgactccacgtggatcttgtacaacaagcctaaaggaaat
gagctcactaatgaatatgctgggtttttgatggcgcttggtttgaatgaacaccttatt
catttacattctttgaacgtccatgattacctcagcaaaggtagtgaaatgactacagtg
ggattactgcttggtctggccgcagccaaaagaggaacaatggactttgctaccactagg
attcttagtattcacgtggcagccttcctaccaccaacctccactgagctgaatgttccc
cacaatgtacaggtggcagccattctgggtgttggattagtttaccaaggcactgctcac
agacacacctcagaggtcctgctttctgaaataggccgcccccctggaccagagctagac
aactgtacggatcgagaatcctattccctcgctgcaggccttgcattgggactggttatg
tttggaaaaggaaatgaagtcattggaacatcagaccttggaatggcagacaccctttgt
cacttcatgactggtggacacaagcgtcccttgataggaagcaataaagagagatacaaa
gcacccagctatcaaattaaggagggggacaatataaatgttgatgtgacttcaccagga
gccactctcgctcttggcatgctttacttcagaacaaacaacagtgctgtcatagattgg
ttgagagtaccagatacacagtttatgttggaccaagttcgaccggatttcctcatgctt
aggacaatatcaagaggattggtttcatgggattttgttgttccaagctttgaatggatt
aaatctatgattccgcagatactgcaggaaaaggcttttgaaagaaaacaaggggaggaa
gatgatgtaatgattgattatgaaacaatgagtcaaagttattgcaatgtggtggctgga
ggctgtttggttattggactaaaatttgcaggaacagccaatcagatggcttttggaaca
ctgatgaagagcataaagcttgctttgacaataatgtccagtcaatctcatgtggagcag
acagggagaggtgtgctagagaactgtatggtcactattctcctctcactagctatggta
atggcaggctctgggaatctcgaggtcctgcgactttgtcgtatgttgcgtgcacgaatc
ggaccaccacacaatatctttgtgacctacggttctcatatggcaatcagcatgtctgtt
ggattacttttccttggtggtggcagatattcactcagtacaactccagaagctattgga
ataatgttatgtgcatttttcccaaagtttcctttccacagtaatgacaacagatatcat
ttgcaagcctttcgtcatctatatgtactggccactgaagctagggtggtgcttccaaga
gatgtagattcgggagaaccttgttacgtacctctggaaatcagattcaaagacacggca
gattactgtggggaagttttcaggacttcagctcctacacttcttcctgagttagataaa
attgaagaggttaaaatattgggaccaaggtattggcctataacatttcatattgacaag
aattggagtaccctaaatctgctcctgaagaaaaatggaatcttgtttgtgaagcagaga
gctgggtacttgtcatatgtgttggatccaaagatttgtttgccaaagttgccaaaaact
tatatgaagggatacagaagtgtattagcgaaatcactgacaagtgaccactccagccat
acatctgttaagcctgatgtcatcaaagcttttaccactgatcctgttatatcatcaatg
gcagattatttcctgatgggaaaggatgattgtcagagaaatagaactcttcagaagctg
tcatctatattgtattcctgtgtcactcaagaaaaaccagaagtgatctctactcatctt
agacttgatcaggtcctaaaccaatccaacttttcattgactcaccttgggattagacag
cttaagaatattctagcatattataacagtccattcaacttgggaaaattagagaatgtt
tcctccacacagctgttgcaaatggaatttcttttagctcttaagtcacagctagaagat
aggctggatagatggcaagcagcaaatatggagggaatagtgaagtatctgcagacaaat
gttgttgagagttgtgatctggtcctgttgtcagcttatgtcacatggtacaacattcca
acaccagaggaaatttcaaagataatagttgaaggtggcccaacccttccagtcttatgc
tccactctcccacatttaccagtaaacacggtgatgcagattctcgctgcttggcaggct
gcagtatga
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