Magallana gigas (Pacific oyster): 105321538
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Entry
105321538 CDS
T03920
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105321538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crg03400
]
105321538
Enzymes [BR:
crg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
105321538
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105321538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Sporozoite_P67
BSP_II
Motif
Other DBs
NCBI-GeneID:
105321538
NCBI-ProteinID:
XP_011418153
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All DBs
Position
6:51049603..51053538
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AA seq
374 aa
AA seq
DB search
MPECPELHLASQFVNIVCKGRIFKGPVIKSEVSKLAEVDFNGEYTISAASRGKEIKLTLV
PYGNGKKSANKRKPLDIVFQFGMSGRFDFDKVAEMRKHAHLNFFTKDEPRMVLSYVDPRR
FGKWQVGGDWSTKRGPCVLFEYDEFRRNVLENVKNPAFNKPICECLLNQKYFNGVGNYLR
SEILFRAGIPPFVSARSVLEPLTNGVTKSGVKVKKESPDVLELCHTVPQEVVNLKGGGYD
PWGRDKNFAIFIGWLQCYNKPEMKNMGDHNKRTVFYCGDPGPMVPKDIQVRGVKRFPKQA
NVSSKKMKKDLESSSESSEEEEEEEEEVLTKGKKEDGGSKAKPKLARSSTKSKLTRPSKG
HRPDRGSARSARKK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaatgtcctgaactgcatcttgccagccagtttgtgaatatcgtgtgtaaaggt
agaatattcaaaggtcctgttataaaatcggaggtaagcaaacttgcagaagttgacttc
aacggtgaatacacaatttctgccgcctccaggggaaaagaaatcaaacttacattagtc
ccttatggaaatggaaagaaatctgccaacaaacgcaaacccctggatattgtttttcaa
ttcggaatgtcaggaaggtttgatttcgacaaggtggcggagatgagaaagcatgcccac
ctgaatttctttactaaagatgagccgcggatggtgctgagttatgttgacccaagaagg
tttggaaagtggcaggtgggaggggactggtcaacaaagaggggaccgtgtgtcttattt
gaatatgacgaattcaggaggaatgtcttggaaaatgtgaagaatccagccttcaacaaa
ccaatatgtgaatgtcttctaaaccaaaagtactttaatggtgtcggaaactacctgaga
tcagaaattttgttcagggctgggatacccccctttgtgtcagcaaggtctgtattggag
cccctgacgaatggagtgacaaagagtggggtcaaagtgaaaaaggaatcccctgatgtc
ttggagctgtgtcacacagtaccacaggaagtggtcaacctgaaaggcggtggatatgac
ccgtggggcagagataagaactttgccattttcattggatggctccagtgctataataaa
ccagagatgaaaaacatgggagaccacaacaagaggacagtattttactgtggtgaccca
gggccaatggtgccaaaagatattcaagtaagaggagtaaaaaggtttccgaaacaggcc
aatgtttcatcaaagaaaatgaagaaagacttggagtcttcatcagagtcatcggaggaa
gaggaagaggaggaggaggaggttctgaccaaagggaagaaggaagatggaggctcaaag
gcaaaaccaaaattagcaagatcgtctacaaaatcaaaattaacaaggccatctaaagga
caccgaccagataggggctcagctaggtctgctagaaagaagtag
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