KEGG   Magallana gigas (Pacific oyster): 105322157
Entry
105322157         CDS       T03920                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105322157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crg03041]
    105322157
   04121 Ubiquitin system [BR:crg04121]
    105322157
Spliceosome [BR:crg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    105322157
Ubiquitin system [BR:crg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105322157
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 105322157
NCBI-ProteinID: XP_011419002
UniProt: K1QY30
LinkDB
Position
6:12556986..12567130
AA seq 800 aa
MGSSKKHKEKDKDKEHKKKRKHRSRSRSKERKRHRHDRDREYSDRERYRRDDGFHENEDY
YPRELDDVDSKSSFRESYTDAPETAGGSSGDVSLSIEETNRIRAKLGLKPLEVGNEKKQQ
HTDDGYLITQEGDVHKPALSITKKKETEKLSERIQKMKDKRKIKDKLGTIKTLGESDEED
DALAWVKKSRQKQKEKELAEKRAKQLMELDEAFGLEDIVKEEFKGNQKEYTSKDLKGLKV
EHSVDRFKDGQAIILTLQDKGVLDEEEGDTLINVNIVDDEKAEKNVELKKKKPDYNPYDA
GDVDEYGMFKEKNVLEKYDEEIAGAKKEKFQLGSGGKFNTDPEKQMDEIRRQLREQSESL
GGVSLNPINEYLTPQELAEAAKFKKVKKKVRKIRKKEALKADDLLPLPNQDLDDTDYGPR
KKSRGYIKKEEEEYPDQASHENNGYGQTAPIVIDYAHGHTAVTVKEQPMDVDQPDEEEDL
IGPDEDLSKVVIEEDEAEKELHSALSKARKLKQKKEGSSVSKVAEQVLSKVKAEPEEALQ
DGNIILNATSEFCRTLGDIPTYGQSGNREEDQEELVDFEKELEDRKKQEEDEQVTGWNAV
EIDETPVNITGEEQAVLDDEPVVSSGVGAALELAKKKGYIEDEEKKLAGARRSKAKEELE
VQNYSIEDKRYDDLDEKYSRKRDRYSGGGGMIQDFKEKDGYKPDVKLEYVDDSGRMLNRK
EAFRQLSHRFHGKGSGKKKTEKRSKKQQEEQLMKQMSSTDTPLGTLNMLQEKQRSEKSPY
IVLSGSKGFSSNSIIKPSQN
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgggatcttccaagaaacataaagagaaagataaagacaaggaacataaaaagaaaagg
aaacatcgatctcgttctcgatctaaagagagaaaaagacatcggcatgaccgtgacaga
gaatattcggatcgtgaaagatatcgcagagacgatggcttccacgagaatgaagattac
tatcccagagaactggatgatgttgatagcaagagttcctttagagagtcctacacagat
gctccagagacagcgggaggatccagtggggatgtctctctcagcattgaagaaacaaat
cgcatccgagccaagttaggattaaagccccttgaagttggtaatgagaagaagcagcag
cacactgatgatggttacttaataacacaggaaggggatgttcataagcctgcactaagt
ataacaaagaagaaagagactgaaaaactctcagagagaatacaaaaaatgaaggataaa
aggaaaatcaaagataaacttggtacaataaaaaccctgggagagagtgatgaggaggat
gatgcattagcatgggtgaaaaaaagtcgacagaaacagaaagaaaaggagctggctgag
aaaagggccaaacaattgatggaacttgatgaggcttttggacttgaggacattgttaag
gaagaattcaaaggcaatcagaaggagtacacatcaaaagatctcaagggtttaaaagtt
gagcactctgttgacagatttaaagatggacaggctatcatcttgacacttcaggacaaa
ggggtgctggatgaggaagagggagacactctgattaacgtgaacattgtggatgatgaa
aaagctgagaaaaatgtggagcttaagaaaaagaagccagactacaatccttatgatgct
ggcgatgtggatgaatatggaatgtttaaagagaagaatgttcttgagaaatatgatgaa
gaaatagcaggtgcaaagaaagagaagtttcagctgggatctggtgggaaattcaacaca
gacccagagaaacagatggacgagattcgtcgacagctgcgagaacaaagcgagtccttg
ggaggcgtgtctctgaatcccatcaacgagtaccttaccccacaggaattagcagaagct
gccaagtttaagaaagtgaagaaaaaagtgagaaaaatcagaaagaaagaggcattaaag
gcagatgatctccttcccctaccaaatcaagatcttgatgacacagattatggaccaaga
aaaaaaagcagaggatatataaagaaagaggaggaagaatatccggatcaagccagccat
gagaataatggctacggacagaccgctcccattgttatagactatgctcatggtcacact
gcggtcaccgtcaaagagcagccaatggatgtagaccagcccgatgaggaggaagactta
atcggtccagatgaggatttaagcaaagttgtgatagaagaggatgaggcagagaaagaa
ctgcactctgctctgtctaaagccaggaaactaaagcagaagaaagagggctcaagtgtg
agtaaggtagcagaacaggtgctctccaaggtgaaggctgaaccagaggaagccctgcag
gatgggaacattatcctgaatgcgacgtctgagttctgtagaacactgggggatatcccg
acatacggacagtcagggaaccgagaggaggaccaggaagaactcgttgattttgagaag
gagcttgaggatagaaaaaaacaagaggaagacgaacaggttactggatggaacgcggtg
gaaattgacgagacacctgttaatatcaccggagaggaacaggctgtgttagatgatgag
ccggttgtaagctctggtgttggagctgccctggagttggccaaaaagaaaggctacatt
gaagatgaagaaaagaagctggcaggagccaggagaagtaaggccaaggaggagctggag
gtccagaattactccatagaggacaagagatatgacgaccttgatgaaaaatatagcagg
aagagggatcgttacagtgggggaggggggatgattcaggacttcaaggaaaaagatgga
tacaaacccgacgttaagttggaatatgtcgatgacagtggtcgaatgctgaatcgaaag
gaagctttcaggcagttgtctcacagattccacggaaagggttcaggcaaaaagaaaaca
gagaaacgaagtaaaaaacaacaggaggagcagttaatgaagcagatgagctctactgat
acacccctcggtaccctgaacatgctgcaagaaaaacagagatcagaaaaatctccttac
atcgtgttgtctggctccaaaggattttcatcaaattccatcatcaaaccaagccaaaat
tga

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