Magallana gigas (Pacific oyster): 105322216
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Entry
105322216 CDS
T03920
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105322216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105322216
Spliceosome [BR:
crg03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
105322216
Complex B
105322216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
RRM_PARP14_3
xRRM
Motif
Other DBs
NCBI-GeneID:
105322216
NCBI-ProteinID:
XP_065941466
LinkDB
All DBs
Position
5:complement(40540077..40545447)
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AA seq
232 aa
AA seq
DB search
MDARPNQTIYINNLNEKVKKDELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKDIN
SANSALRSMQGFPFYEKPMRIQYSKKDSDIIAKMKGTFVERPKRPKEHEPESKKKKKANR
QAAATTAGIAPPAQPAMAAAPPAQPAAPTAIPEQPPNQILFLTNLPEETNEMMLSMLFNQ
FPGFKEVRLVPGRHDIAFVEFENEVQSGAAKDALQGFKITPSNAMKISYAKK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagaccaaaccagacaatatacattaacaatttgaatgaaaaagtgaagaaa
gatgaacttaagaagtcactgtacgcaatcttctcccagttcggccagatcctggatatt
gttgccatgaaaactttgaagatgaggggacaagcttttgtgatattcaaggacataaac
agtgccaatagtgcacttcgatcaatgcagggtttcccattttatgaaaaaccaatgaga
atacagtactcaaagaaagattcagacataattgccaaaatgaaaggaacatttgtggaa
agaccaaaaagacctaaggaacatgaaccagaaagcaagaagaaaaagaaggctaataga
caagcagctgctacaactgctggaattgcacccccagctcagccagctatggccgccgcc
cctcccgctcagcccgctgctcccactgctatcccagaacaaccccccaatcaaatcctc
ttcctcaccaatttacccgaggagactaacgaaatgatgttgtccatgttgtttaatcaa
ttccctggatttaaggaagttcgtcttgtgccgggtcgtcatgacattgcttttgtcgag
ttcgagaatgaggttcagtcaggtgctgcaaaagacgcgctgcagggattcaaaatcact
ccaagcaatgccatgaagatctcctatgcaaaaaagtag
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