Magallana gigas (Pacific oyster): 105322308
Help
Entry
105322308 CDS
T03920
Name
(RefSeq) glutamate-gated chloride channel alpha
KO
K05194
glycine receptor alpha-2
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105322308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crg04040
]
105322308
Ion channels [BR:
crg04040
]
Ligand-gated channels
Glycine
105322308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
MscL
TPR_DOP1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
105322308
NCBI-ProteinID:
XP_011419249
LinkDB
All DBs
Position
2:complement(31470577..31473376)
Genome browser
AA seq
378 aa
AA seq
DB search
MPISLYLACSIFSTVVGILAALPSWDQLEANLSRVDYDLPPWIHTGQVTQVRTQLLFTYI
QSATLTELATSFHLIQQWEDVRLQYDASSIIFAGKYVLVDQDKYATIWTPDSYISNAISE
VQHSVTKPNVFIRIYPNGTLVKSTRLTVRTPCPLTSQGFPRGSQSCEITIESYTYSASEM
SMVWDQQNPFRYKHPFSASSSSVTNIKEGSCTDPAQEYPCLKYNVGIVRDFSQYILRIYV
PSLFIVILGWMSMWIDKAQVGARTSLGVLGVLTIVTQLVGVVSLGNGLEGVLAIDIWIAV
CMLFTIMALCVFAVVHNMKRRKDKSKNKYKENSGTEEGDENSCCKIQHGKLQNIFRVVYP
FLFITFNVVYWAYFLNVN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcccatttctttatacctagcttgttctattttctccacagtggtcggaattctcgct
gctttgccaagttgggaccaactagaagcaaacttgtctcgcgttgactatgatctacct
ccttggatacacacaggtcaagttacacaggtcaggacccagcttctattcacctacatc
cagtctgcaacccttacggagcttgccacgtcatttcatttgattcagcaatgggaggac
gttcgtctacagtacgacgccagctccatcatttttgcggggaaatacgttttggtggac
caggataaatacgccacgatatggacgcccgatagttacatcagcaacgccatatctgaa
gttcagcacagcgtaaccaaacccaatgtattcatacgcatctatcctaacggaacttta
gtcaaaagtacaagactgacagttcgaacaccatgccctctgacgtcacaaggttttcca
cgtggttctcagtcttgcgaaattacaattgaaagttacacctattcagcatcggagatg
agcatggtttgggaccaacagaacccttttagatacaagcacccgttttccgccagtagt
tcaagtgtaacaaatataaaagaaggcagctgcacagacccagcacaagagtacccctgt
ttaaaatacaatgtggggatagtgagggatttcagccaatacatattacgtatctacgtc
cctagcttgttcatcgtcatcttgggatggatgagtatgtggattgacaaggctcaagtc
ggcgcgcgcaccagtctgggcgtgttaggtgttctcaccatagtaacacaactggtgggc
gtggtttctctaggaaatggactagagggggtgttggccattgacatttggattgcagta
tgcatgctattcaccattatggctctgtgtgtcttcgctgttgttcataacatgaaacgg
aggaaggataagtccaaaaacaaatataaggagaattctggaactgaagaaggtgatgaa
aattcttgttgtaaaatccaacacggaaaattacagaatatatttagagttgtctaccct
tttcttttcataacgtttaatgttgtatattgggcctacttcttaaacgtgaattaa
DBGET
integrated database retrieval system
