Magallana gigas (Pacific oyster): 105322394
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Entry
105322394 CDS
T03920
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg02010
ABC transporters
crg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105322394
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105322394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crg02000
]
105322394
Transporters [BR:
crg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
105322394
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
105322394
NCBI-ProteinID:
XP_034310968
LinkDB
All DBs
Position
7:39091415..39111772
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AA seq
2358 aa
AA seq
DB search
MGFWKELGLLLWKNYTLRKRQKFRLLAEIVTPTILLLVLVLVRTRPDLQEYNHECHFDGK
AMPSAGVLPFLQSFFCTFNNTCHATSTQDEKPGSVGNFDNSILTNLVFDIEEILNSNIDR
ELIGDLLEDWEIITQIMTKINSGTTTGAIRIGTILGNPQNISDVVKAQKINLSIDVLINV
MNATLDFNKLNKPSLNKIFKDFDTCPDSNHGQPAAMEIWQRICDTGSVLYAIDFHSDEAL
KQSKKELCALDNADLEHMYQAFRAQFSIQRFFIQMFKFIFLNTKKIPNIQDIYKRFKKLI
SDLTSLKELDLKKMEKFFRDMNKKKINSTLIVQNLGDFVCGANSFLRMQSKRSEDLFERF
RSHGRLSRGDSNSNTATNDYGPDRPLCRDLVNFLNEDVQTQILWKNLRPVVLGKITYAPD
IPSVRKIIEKANQTFSDFARAVQLAKDWEGYIESVQKHFAGSPTYDILRRFSGSCLCDLV
ENITMTAFGKTKTVGICRFMKTLLNGNPDIGSYNWRDIIKFTKSLARVIADYGECMIFDK
FVGFATEEEMLAESTKMVENNTLWGALVFDISNETHKYSLPSHVSYKIRMDADRVETTDR
VLDQVYKPGPRRTPGKETKFLSYGFAYLQDMVEHSIIKLQTGSDKDVGVMVEQFPYPCYI
RDSFTYAIEIVLPLLLVLAWILPVAMLCKNIVYEKEKRLKEVMRMMGLGNGVHWLAWFIN
AFVVMMFTMGLLVVLLTYGKVIQYTDPTVLLFFFSTFALATIMQCFFFSVLFHQANLAAC
SAGFLYFTLYIPYVLAKRWQEFLHLSEKMAICLSSSIAFGFGCFKIAQFEQQAVGVQWHN
IWDSPMTGDDFSMMHIIIMMFVDAILYGLLTWYIEAVFPGQYGTPRPWYFFVLKSYWCGN
KINAGNLEEGLSPYFDPEGKPVEDEPQDRTLGVAIRDLKKVYSEGNKVAVNGLSLNFYEG
QITSFLGHNGAGKTTTMSILTGMFPPTDGTAYIYGKDIRKNMDEIRQSLGVCPQHDLLFQ
FMTVTEHLWFYSQLKGLSLQETTNEINPMISDIGLGHRKHAFPHMLSGGMKRKLSVAIAF
VGHVKTVILDEPTAGVDPYSRRSIWELLLKYKEGRTIILSTHHMDEADVLGDRIAIISQG
KLCCCGSSLFLKSQYGNGYYLTIVRNLNEEQTKDKGDKSASGQTSPSLGKKSPVPAPRRK
ANHKLVDETEPIHHSISCVEKLKKEEIICHSECNSGKSEPSVVTEEFLQFTRKRLQAFVR
KFVKKAKFIEDNSTEVSFLLPEASAHNGDFEDLFMELERSRKKLGISSFGVSDTSLEEVF
LRVAEQDGEKQSDEVKRNKLEENTDRGRVPRPVTNLSFRHNRKASYLRSQSVEERNETLN
LEESSADGFNHELQEKIKGKKLLFMQFYALLIKRFHHFKRSKKGFLCEVVMPVLFILISM
VFAKIESPYSEPKPMTLHPWHLTPKQYDPHLSMFYSLDENSHLGTDMVTMLKSDYGVGNR
CLNPEIYTLQEYQCQPQYSAIYISDNHSNQTLECSCSSGVQRCPEGAEGPATPLQMLATT
DFLYDLTNRNISDWLLKTHDRFIGRRFGGFSFGEKTKLAKLNNQNVQELLQKFSLLKTDD
KSFGIDNDKIWSNVALLLHTMATEDIVKVWYNNKGYIAVVSYMNVANNLILRSKLPRSKD
PSEYGITVINHPLQLSKQQSHQESKFNSKADVLVATCVIFAMSFIPASFVMILIEERISS
SKHLQFVSGVNPTVYWSTNFLWDMLNYSISCVLCICIFLGFQVEAYVSPTNIPCLILLLI
LFGYALIPMMYPFSRLFNVASTAMVTLKSINIFIGTTSTLSTFILELLAEEDQQLQYIND
LLKNVMLIFPQYCLGLGLMEMSRNQLYSDAFKKFDLKNITSPLKFDMVGKNILALFLQGT
FFFSLNLLIEYNFFIKPRQINIKDYPHENDDEDVEKERQRVLEGGSADDIVRVENMTKIY
QMAEKKSKHTAVDRLCVGIPKGQCFGLLGVNGAGKTTTFKMLTGDIPMSSGAAYIAGHSV
IDEIDVVRESVGYCPQFDAYDPLLTSREVLVFYARLRGIPEKDVNKVADWGIKKLGLIPY
ANKLSGGYSGGNKRKLSTAIALLGNPKVIFLDEPTTGMDPKARRFLWTCINSIVKDGRSI
IMTSHSMEECEALCGRLAIMVNGKFRCIGSIQHLKNRFGDGYTILIRVSGNNPNLEPVEQ
YINTMFPGSTLKEKHHNMLQYQLGPTIKLSYIFGQIESVRHEFSIEDYSVSQTTLDQVFI
NFAKNQSDILPEEETTSESANLPASDTHNEGVPSIENNTLSNLRVSQTGSTIHLIGSEVD
DPIYVNTSFVSELEETDV
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgggattctggaaagagttgggtttgctattatggaaaaattataccctaagaaaaagg
caaaagttccgcctgttggctgagatagtgactcccaccattttgttgttagtgctagtg
ttggtcagaactcgaccggatttacaggagtataaccatgaatgtcattttgatgggaaa
gccatgcccagtgcaggagtgctgccctttctacagtccttcttctgtaccttcaataac
acctgccatgccacatctacacaggatgaaaaaccaggcagtgtgggcaactttgataat
tcaatacttacaaatttggtttttgacatcgaggaaattctgaacagcaacatagaccgt
gagctgattggtgatttactagaagactgggagataatcactcagataatgaccaagatc
aacagtggcaccacaacaggggcaatacggattggaaccattttgggaaatcctcaaaac
atcagtgatgttgtcaaagcccaaaaaatcaatctgtctatagatgttctaattaatgtc
atgaacgcaactctggacttcaacaagctgaacaaaccaagtctgaataagatattcaag
gactttgacacctgtcctgattccaatcatggccagccagccgccatggaaatctggcag
cgcatctgtgacacaggaagtgtactgtatgccatagacttccacagcgacgaggctctg
aaacagagtaaaaaggagctgtgtgccctcgacaatgctgaccttgaacacatgtatcaa
gcattcagggcccagtttagcattcagagattcttcattcagatgtttaaattcatattt
ttaaacaccaaaaaaattcccaacattcaagacatctacaagagatttaaaaaattgatt
agtgatttaacatccctgaaggaattggatttgaagaaaatggagaaatttttcagagat
atgaataaaaagaaaatcaattctactctgattgtccagaatcttggggactttgtttgt
ggtgctaactcttttttacggatgcaaagcaaacgctctgaggatctctttgagaggttt
cgatctcatggtcggttgtcaagaggagattcaaactcgaacacggcaactaatgactat
ggtcctgatcgtcctctatgtcgtgacctggtgaatttccttaatgaagacgtccagaca
caaattctgtggaagaacctcagacctgttgtacttggaaagatcacatatgcccctgat
ataccttctgtcagaaaaatcattgaaaaggcaaatcagaccttctctgattttgcaaga
gctgtgcaactggccaaggattgggaaggatatatagaatctgtacagaagcactttgca
gggagtccaacttatgatattcttagaaggttttcagggtcatgtctttgtgatttggtg
gagaatatcacaatgacagcatttggtaaaacaaagactgtaggaatatgccgattcatg
aagacgcttctgaatgggaacccagacattggcagctataactggagggacatcataaag
ttcacaaaatccttggctagggttatagcagactatggagagtgtatgatttttgacaag
tttgttggatttgccacagaggaggaaatgctggcagagagtacaaagatggtggaaaat
aacactctgtggggagctctggtgtttgacattagtaatgagactcacaagtactcattg
ccttcccatgtctcctacaagatcagaatggatgcagacagagtggaaacaacggataga
gtactagaccaagtgtacaagccaggtccaaggcgaaccccagggaaggagactaagttc
ctgtcttatggctttgcctatctccaggacatggtggagcactccatcataaagctacag
acagggtcagacaaggatgtgggggtaatggtggagcagtttccttatccatgctatatt
agggactcgttcacatacgccattgagattgttcttcctcttctcttggtccttgcctgg
attttacctgttgcaatgctgtgtaaaaatattgtatatgagaaggagaagaggttaaag
gaagtgatgaggatgatgggattgggtaatggtgtccactggctggcctggttcatcaat
gcgtttgttgtcatgatgtttacaatgggacttctagttgttttattgacatatggtaaa
gtcatccagtacacagaccccacagttttgctgttcttcttcagtacctttgctttggct
accatcatgcagtgctttttcttcagtgtgcttttccatcaggccaatctagcagcttgc
agcgctggctttctctactttaccctgtatattccatatgtgttagcaaagcgctggcag
gagtttttacatctctcagaaaaaatggccatctgcttatcctccagcattgcctttggg
tttggctgctttaagattgctcagtttgagcagcaggcagttggagtacaatggcacaac
atctgggacagccccatgacaggggatgatttctccatgatgcacattatcatcatgatg
tttgttgatgctatcctctatggcctcctcacatggtacatcgaggcagtgttcccaggg
cagtatggaactcccaggccttggtacttcttcgttttgaagtcatactggtgtgggaat
aaaataaatgcaggaaacttagaggaaggcctctctccatattttgatcctgaaggcaag
ccagtggaggatgagccacaagacaggactttaggtgtggccatcagagatctgaagaag
gtgtacagtgagggaaacaaggtggcggtcaatggactgagtctgaacttctatgaggga
caaatcacctccttccttgggcacaatggagcaggaaaaaccaccaccatgtccatcttg
acaggaatgttccctccaacagatggcacagcatatatttatggaaaagacatcagaaaa
aacatggatgaaattcgacagagtttgggagtgtgcccacaacatgacctcctgtttcag
tttatgactgtgacggagcacctctggttttattcacagctgaaaggattaagccttcag
gagactaccaatgaaataaacccgatgatcagtgacattggactgggacataggaagcat
gcctttcctcacatgctctcaggtggaatgaagaggaagctgtctgttgcgatcgccttt
gtaggacatgtgaagactgtgatcctggatgagccaacagctggagtagatccatactcc
aggagatccatctgggagttactgctcaagtacaaagagggaagaaccattattttatcc
acacaccacatggatgaagctgatgttctgggagacaggatagccatcatctcacaggga
aagctctgttgctgtggctccagcctctttctgaaatcccaatatggaaatggttactat
ctcacaatagtaaggaatctcaatgaggagcagacaaaagacaagggagataaatctgca
tctggacagaccagtccttctcttgggaagaaaagcccagttcctgctcccaggaggaaa
gccaatcataagctggtagatgaaacggagcccattcatcatagcatatcttgtgtggag
aagctgaagaaagaagaaatcatctgtcattcagagtgtaattcaggaaaatcagaaccc
tcagttgtaacagaggaattccttcagtttacaaggaagcggttgcaagcatttgttaga
aagtttgtgaagaaggccaagtttattgaggataattcgacagaggtgagcttcctctta
cctgaggccagcgcccacaatggagacttcgaggaccttttcatggaactggagagatcc
aggaagaagctcggaatctccagctttggtgtatcggataccagtctagaagaggtgttt
ttgagagtagccgaacaagatggggagaaacaatcagatgaagtgaaaagaaacaaactt
gaggaaaacacagacagggggcgtgtcccgaggcctgtcactaacctcagtttccgacat
aacaggaaggcgtcttacctgaggtcccagtctgtggaggagagaaatgaaacccttaat
ctggaggagagcagtgctgatggattcaatcatgagttacaagaaaaaattaaagggaaa
aaactcttgtttatgcagttttatgctttacttattaaaaggtttcatcattttaagaga
agcaagaagggctttctctgtgaggtcgtgatgccagtgctatttatcttgatatccatg
gtatttgccaaaatagaatcgccttactccgagcccaagcctatgaccttacacccctgg
catttaacacctaagcagtatgacccacacttgtcaatgttttacagcttggatgaaaat
tcacatttgggaacagatatggtgacaatgctaaaatctgactacggggttgggaatcgg
tgtcttaatccagaaatctatacgttacaagagtatcaatgtcaaccccagtattcagcc
atctatatctctgataaccatagtaaccagactctagagtgttcctgtagttctggggta
cagcgctgtccagaaggagcagaaggtcctgctactccattacagatgctggccaccact
gacttcctgtatgacctcaccaacagaaacatttctgattggctactgaagacccatgat
cgattcattggtagaagatttggagggttctcatttggagagaaaaccaaacttgccaaa
ctgaataaccagaatgttcaggaacttctacagaaattctccctgttaaaaactgatgat
aagtcctttggaattgacaatgataaaatctggagtaatgtggctcttctattacacacc
atggctacagaggatattgtcaaggtttggtacaacaacaaaggctacattgctgtggtg
tcctacatgaacgtggccaacaacttgattctgaggagtaagctcccccgcagtaaggac
cccagtgagtacggcatcactgtcatcaaccacccactgcagctgtccaaacaacagtcc
caccaggagtccaagtttaacagtaaggctgacgtgttggttgctacttgtgttattttt
gccatgtcctttattccggccagttttgtgatgattttgattgaggagaggatctcaagc
tccaaacacctgcagtttgtgagtggtgtcaaccccactgtgtactggtcaaccaacttc
ctatgggacatgctgaactattccatctcctgtgtactgtgtatctgcattttcctggga
ttccaggtggaggcctatgtgagccccaccaacattccgtgcctcattcttctcctcatt
ctgtttgggtatgccctgattcctatgatgtatccgttttcccgcctctttaatgtggcc
agcacagccatggtgaccttgaagtctataaatatcttcatagggaccacctccacactg
tccacctttatactggaactcctggccgaggaggatcagcaactccagtacattaacgat
ctcctgaagaatgtgatgttgatcttcccccagtactgccttggtctgggactgatggag
atgtcccgcaaccaactgtacagtgacgccttcaaaaagtttgatttgaagaacataacc
tccccactgaagtttgatatggtgggaaaaaacatcttggctttgtttctgcagggaacc
ttcttcttctctctgaatctcctgattgaatacaacttcttcatcaaaccaagacagatc
aacatcaaggattacccccatgagaatgatgatgaggatgtagaaaaggagagacagcgg
gtgttggagggagggtcagccgacgacatagtccgtgtggaaaacatgaccaagatttat
caaatggctgagaagaagtccaagcacactgctgtggacagactgtgtgtggggatccct
aagggtcagtgctttggattgctgggggtcaatggtgcagggaaaaccaccacatttaaa
atgctgactggggatatccccatgtcaagtggagcagcctacatcgctggtcacagcgtg
attgatgagattgatgtagtgcgtgagagtgtgggctactgtccacagtttgatgcgtat
gaccctctactcacatccagagaagtccttgtgttttatgccagactgagaggaattcca
gagaaagatgtcaataaggttgctgattggggaatcaagaaactggggctgattccttat
gcaaacaaactctctgggggctactcaggtggaaacaagagaaagctctcaacagccatt
gctttacttggaaatcctaaagtcatctttttggatgagcctaccactggaatggaccca
aaggccagacgcttcttgtggacctgtatcaacagtatagtcaaagatggccgctcaatc
attatgacatcacacagtatggaggagtgtgaagctttatgcggcagactggctatcatg
gtgaatggcaagttcagatgtattggtagcatacagcacctcaagaacagatttggggat
ggatacaccattttgatacgagtgtcagggaataaccctaacctggagccagtagaacaa
tacatcaacactatgtttccaggcagtaccctgaaggagaagcaccacaacatgctacag
taccagctggggcccaccattaaactatcctacatattcggtcagatcgagtctgtccgc
catgaattctctatagaggattactctgtctcacaaaccacacttgatcaagtgttcatt
aattttgcaaagaatcagagtgatattctccctgaggaggaaactacttctgaatcagca
aatttaccagcttcagatacccataatgaaggtgtaccatcaatagaaaacaacacattg
tcaaatttgagagtgagccaaacaggaagtacaatacacctgattggaagcgaggttgat
gacccaatttatgtgaatacatcatttgtgtcagaattggaagaaactgatgtgtga
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integrated database retrieval system
