Magallana gigas (Pacific oyster): 105322496
Help
Entry
105322496 CDS
T03920
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105322496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105322496
Membrane trafficking [BR:
crg04131
]
Autophagy
Other autophagy associated proteins
Others
105322496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
105322496
NCBI-ProteinID:
XP_034329210
LinkDB
All DBs
Position
8:complement(9949248..9964166)
Genome browser
AA seq
951 aa
AA seq
DB search
MSDEVNADHNYRSERQSLLFGLKAVTEGLLSGQSSNVWNIHGGLNRMCVQLEHIMYHGLK
SIKGNLGIELDFWPFVYSLKMLNPVLAPALDKVNRSGGNKGSMWLRESLRDHTLSSQLSS
LVCNKSLMKRFYSDLAFLNDAQYFKALCVCLKAIELNQISLLAELDLKLLSNNHEPNMRG
SRSRSWAVPERKHHISTSEGKSSSHGAMALAPPFASPKKESILCMSDEHAVPSSIRASTS
PEDTKNMARESLRTVLRKSGSDSPTGDAPDFSFYDNLNSDPLLNIEFSENAATDSENSHA
EVGSGERIVNSSAKKAIVRSQSDTGMSKTLTVIKNIYKDNEDFEPGKSGTVNRLEDIFSD
SECPKKGEKENVKVKAKSKGHKRSRSDHGGIKVEKGPQKEKGKVPNKTQREDSSEPASKD
IPGETTFRQPVHGQSLINYLSSQDFNTCANLDKENAHFSISEALIAAIEQMKWNHVISPK
DREDPEEEDSDEEINKLKQRIRIRKQQKLREKARFFPTSSDGLTDTATTSKSPSSVLNSS
CQDNTDSSNSDIEVDEINLTISDNEQDNETNLSLIKSEGLSLSLASLYSDADLQKVKPDR
QSSMEISDQSGMSAESVAILLLKKFSEKQLPKASELEWLVPISEAPQELLPLPKSYPVSP
DDIENEIGGFTNSLFGTLRLRGNNEWAPPRSQIIFDIHPYQKRAVVMAKQNFRCAGCGTR
VEPAYIKRFRYCEYLGKYFCQCCHRNEINYIPGHIIRKWDFKQYPVSNFSWRLLSRIFNE
PYFNLSTINPSLFKRVKLLETVHAFRVQLMYLCKFLRICKYSESLVGEINAEPSHWYEDV
DVYSISDLVGIKNSSIVTKLKDLVTKSIDHVEQCSFCQGFGYICELCGDESDIIYPFQLQ
TVVVCKDCTSCFHKACYVEGKCPKCIRIEARRQRQLLETKIFDSSEEESGS
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgaagtcaacgcagatcataattacaggtcagaacgtcaaagcctactgttt
ggattgaaggcagttacagaggggcttttatctggacagagcagcaatgtttggaacatc
catggaggacttaacagaatgtgtgttcaactggaacacattatgtatcatggtttgaag
agtatcaagggaaatttggggatagagttggatttctggccatttgtgtacagtcttaag
atgttgaacccagtcttggcccctgccttagacaaggtcaaccgatcaggaggaaataaa
gggtcaatgtggctgagagaaagtttaagggatcacaccctgtcctcgcagttgtcatcc
ttggtgtgcaacaaatcactgatgaaaaggttttacagtgacttggcattcctgaatgat
gcacaatacttcaaagctctttgtgtttgcttaaaagctattgaactcaaccaaatttcc
ttgttggctgaactagacctaaaactgcttagtaataaccatgaacctaacatgaggggg
tcgaggagtagatcttgggctgtaccagaaagaaaacatcacatatcgaccagtgaggga
aaatcaagctcccatggtgccatggctttggcaccaccatttgcatctccaaaaaaggag
agtatcttgtgtatgtcggatgagcatgctgttccttcttcaatcagagcaagcacaagc
cctgaggacacaaaaaacatggctcgtgaatctttgagaacagttctgcggaaatctggt
tccgactccccaactggggatgcccctgactttagtttctatgacaacctcaacagtgac
ccattattgaatatagagtttagtgaaaatgcggccactgatagtgagaattcacatgca
gaagtgggatccggtgaacgcattgtcaattcaagtgcaaagaaggctatagtgaggagc
cagtcagatacagggatgtcaaaaactttaactgtgattaaaaatatatacaaagacaac
gaggactttgagcccggaaagtcagggactgtgaacaggctcgaggatattttttctgac
tctgagtgccccaaaaagggggaaaaagaaaatgtcaaggtcaaagcaaaatcaaaaggg
cataaaaggtcaaggtcagatcatggaggtataaaagtggagaaaggaccccagaaagaa
aaaggaaaagtgccaaataaaactcagagagaagattcatctgaaccagcaagtaaagat
ataccaggggagacaactttcaggcagcctgtacatggtcagtccctcatcaactacctg
tcttctcaggatttcaacacctgtgccaatctagacaaggagaatgcacatttcagtata
tctgaggcattgatagcagccatagaacaaatgaagtggaaccacgtcataagtccgaag
gaccgtgaggatcctgaggaagaagactcggatgaggaaatcaacaaactaaagcagcga
atccgcatccgcaaacagcagaaactaagggagaaagccagattttttcctacatccagt
gatggacttactgacacggctacaactagcaagagtccctcttcagtgttaaattcttcc
tgtcaagataacacagatagcagtaattcagacattgaggtggatgaaatcaatctaaca
atttcagacaatgagcaagacaatgagaccaatctgagtttgatcaaatctgagggtctt
tcactgtcccttgcctccctgtactcagatgcagatttacagaaagtgaagccagataga
caaagctctatggagatatctgaccaatctggcatgtcagcagagtcggtagccattttg
ttgttaaagaaattctcggaaaagcagcttccaaaggcatccgagctggagtggctggta
cctatatctgaggctccacaggagttacttcccttaccaaagtcatatccagtatctcca
gatgatattgaaaatgagattggaggattcacaaactcgctgtttgggacattgagattg
agagggaacaatgaatgggctcctcccagatcacagatcatctttgacatccatccatat
caaaagagagctgttgttatggcaaagcaaaatttccggtgtgctggatgtggaacccga
gttgaaccagcctatattaaaagattccgatactgtgaatatctagggaaatacttttgt
cagtgttgtcatagaaacgaaatcaactacattccggggcatataatcaggaagtgggat
tttaaacagtatccagtgtccaatttctcttggagattactttcaaggatttttaatgaa
ccttattttaacctaagtacaattaatccatcactgttcaaacgagtgaagttgttggag
acagtccatgcttttagagtgcagctcatgtatctgtgtaaatttctcaggatttgtaaa
tattcagaaagtctggttggtgagataaatgcagagccctcgcattggtatgaagatgtg
gacgtctactccattagtgaccttgttggtataaagaacagttctatagtgacaaagctg
aaggatttagtgacaaagtccatagatcacgtggagcagtgttcgttctgtcagggcttt
ggctacatctgtgagctgtgtggagatgagagtgatatcatctacccattccagttgcag
actgtcgttgtttgcaaagattgcacatcatgtttccataaagcgtgttatgtagaggga
aagtgtcctaaatgtatcaggattgaagcaagaaggcagagacaattgctggaaacgaag
atctttgattcctcagaagaagagagcggaagttaa
DBGET
integrated database retrieval system
