Magallana gigas (Pacific oyster): 105322739
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Entry
105322739 CDS
T03920
Name
(RefSeq) ATP-dependent RNA helicase DDX51
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105322739
Enzymes [BR:
crg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105322739
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
Pre-60S particles
Helicases
105322739
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF3915
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
105322739
NCBI-ProteinID:
XP_011419899
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All DBs
Position
5:complement(38901830..38908466)
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AA seq
713 aa
AA seq
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MALFAITRYLGDDNTEEQSNKADAILKKLQANAEARRKRRGIGTWNTPQDNSKKKLSSEK
DQVKNDLTPKSGEKIKIGKKSKLKECDETGYADSDNEVIPKKKRKGKFDKEEKTSCENNN
SLQAIAQGSESSKLGSNADTTTKELKFRGKAKSVTSGDEEEQEIEDLELGDNGQKADETE
VMGDTQEGAHEYGGFTVLGDYKSKQTERVSRVLPDWLSSPNVIASDLKQKTTLVSEFKGL
DPDIHLNLKENKIDYFFPVQMQVIPEILDTVRYGFVLGRAGFRPPDICVSAPTGSGKTLA
FVLPIIQALKSRVLCRIRAMVVLPVRDLAVQVFKVFLQYTKGTNLKVGMIVGQKQFSVEQ
HALVRQRVGGLESKVDIVVATPGRLVDHINKTPGFSLTDLRFLVIDEADRIMEHVKQDWL
SHVENAVFSGGRTAPSSLNVYNSCKHHMPLQKLLFSATLSQNPEKLQQLNLFQPKLFTSV
VDGGSLPRPLESEGEGNKDDQVTDRLSGPGGEVKGQFVGKYTTPLGLKEYTVEVEAFEKP
LVILHFLHNLQYRHVLCFTNSVESTHRLYHLIRLFGGINVAEITAKLQASRRSKVLKKFQ
NGSIDILICSDAMARGMDIDDVQYVISYDPPPYIKTYIHRVGRTARAGKEGTALSLLQKK
EFHHFKTMTKEAGKTYIEKFKVHSKEMEGLLEKYQAALQQLQQVFMRERFEQR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcattatttgcaataacaaggtatttgggtgatgataatacagaagaacaatcaaac
aaagcagatgccattttgaagaaacttcaagcaaatgctgaggcaaggagaaaacgaaga
ggtattggaacttggaatacaccccaggataactctaagaagaagctgtcatcagaaaaa
gatcaagttaaaaatgacctaacaccaaaatctggagagaagataaaaattggtaaaaag
tctaagctgaaagagtgtgatgaaaccggttatgctgacagtgacaatgaagttattcca
aagaagaaaaggaaaggaaaatttgataaggaagaaaaaacaagctgtgagaataataat
agtttgcaggcaatagcccagggtagtgaaagcagtaaacttggttctaatgctgacacc
acaaccaaggagttaaaattcagaggaaaagcaaaaagtgtgacaagtggagatgaagaa
gaacaagaaattgaagacttagaacttggtgataatggtcaaaaggctgatgaaactgaa
gttatgggtgacacccaagagggtgctcatgaatatggaggctttacagtgctgggggat
tacaagtcaaagcagacagagagggtatcccgtgtattacctgattggctttccagtcca
aatgtgatagcctcggatctgaagcagaaaacaactttagtatctgaattcaaaggcctt
gacccagacatccatttaaacctcaaggaaaataagattgactacttctttccagttcag
atgcaagtgattccagaaatactagacacagtgaggtatggctttgttttggggcgggct
ggatttagaccaccagacatctgtgtatcagctccaacaggcagcggcaaaactctagca
tttgtgttacctatcatacaggctttgaagagccgtgttttgtgtagaattcgagccatg
gtggtcttacctgtcagggacctggctgttcaggtgttcaaggtgttcctacagtacacc
aagggaacaaacctaaaggtgggaatgattgtgggtcagaaacagttcagtgtagagcag
catgccctggttagacaaagggttggtgggttggagagtaaagtggacattgtggtagct
acccccgggcgactagttgatcacatcaacaagactccaggattcagcctcacagatcta
cgctttctggtgatagatgaagcagaccggatcatggaacatgtgaagcaggactggctg
agccatgtagagaatgctgtgttttctgggggcaggacagctcccagctccctcaatgtc
tacaactcttgcaagcatcacatgcctctccagaagctgttattttctgccacactgtcg
caaaatccagagaagttacaacagctcaatctgttccaacccaaactcttcacttctgtg
gtagatggcggctctctcccccgacccctggaatcagaaggcgaggggaataaagacgac
caggtcactgacaggctgagtggcccagggggagaggtcaagggtcagtttgtgggcaaa
tacactactccgcttgggttaaaggagtacacagtggaggtggaggcgtttgagaagcca
ctggtcatccttcacttcttacacaacctccagtaccgccatgttctctgttttaccaac
agcgtagagtccacacacaggttgtaccacttgatccgactgtttggtggtatcaatgta
gcagaaatcactgccaaactacaagcttcacggagaagtaaagtcttaaagaaatttcaa
aacggaagtattgatatcctgatttgctctgatgcaatggcccgaggtatggacatagat
gatgtacaatatgtcatatcgtacgacccacccccctacatcaagacttacattcacagg
gtgggaaggaccgcccgtgctggcaaggagggtactgccttaagcttattacaaaaaaaa
gagttccatcacttcaaaaccatgaccaaagaggcaggtaaaacgtacattgagaaattc
aaagtccacagcaaagagatggagggtctgctggagaaataccaggcagcacttcaacag
cttcaacaggtctttatgagggagaggtttgaacagagatga
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