Magallana gigas (Pacific oyster): 105322763
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Entry
105322763 CDS
T03920
Name
(RefSeq) homeobox protein SIX2
KO
K15615
homeobox protein SIX4
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105322763
Transcription factors [BR:
crg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
105322763
BRITE hierarchy
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GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Sa_NUDIX
DUF7645
HTH_36
Motif
Other DBs
NCBI-GeneID:
105322763
NCBI-ProteinID:
XP_011419940
UniProt:
A0A8W8I5K6
K1RZS7
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Position
6:19257372..19274753
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AA seq
354 aa
AA seq
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MDSSSNGDSGILPVDPVSNCSPGDIPNTPSEDVLNMDTITNEHKNNRVIDSDVRTSDSGS
PNSNSTNSELLSGKNLTFSPEHVACVCEALQQKGDIERLGRFLWSLPPSELLRGSEAVLK
ARATVAFHRGSYRELYAILESHKFDEGNHAFLQQLWYKAHYMEAQKIRGRPLGAVDKYRL
RRKYPLPKTIWDGEETIYCFKEKSRQSLKECYKNNRYPTPDEKRNLAKKTGLTLTQVSNW
FKNRRQRDRTPHQNPGKEMMEESMMHSFGHHQAHHHQHLHHQHHQQQMCNNGQMMVPHDY
GGDLAMSAKMLDARLTDDVRVNLSFVKNEPLPPSYLRSPFDHSHHRFPHTIPPV
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcaagtaatggagattctggtattttaccggtggatccagtgtcgaactgt
tcccccggggacattcccaacaccccatcagaggatgttttgaatatggacaccatcaca
aacgaacacaaaaacaatcgagtgatagactcggacgttcgaacctcagacagcggatcc
ccgaattcgaattcaacaaattcggagttgttgtccggcaaaaatttaactttctcgcca
gaacacgttgcgtgtgtgtgcgaagctctccaacagaagggggatatcgagagactcggg
cgttttctctggtccttaccccccagtgaacttttaagaggaagcgaagcggtgctcaaa
gctagagccacggtggcatttcaccgcgggagttacagagagttatacgccattctggaa
agtcacaaattcgacgagggcaatcatgcttttctgcagcaactttggtacaaggcccac
tatatggaggcacagaaaatccgcgggaggcctctgggtgccgtcgacaagtaccgttta
cgaaggaagtatcctttaccgaaaacaatctgggatggggaggaaactatttactgtttt
aaagagaaatcacgacaatcattgaaagagtgctataaaaataacaggtaccccactccc
gacgagaaaaggaatttagcaaagaaaacgggtctgacattgactcaagtcagtaactgg
ttcaaaaatcgcaggcaacgagaccgcacgccccaccagaacccagggaaagagatgatg
gaagaaagcatgatgcattcatttgggcaccaccaggcgcatcaccaccaacacctccac
caccagcaccaccaacagcaaatgtgtaacaacggacagatgatggtaccacatgactac
ggtggtgacctggctatgtccgccaaaatgctggacgcgcgactgacagacgacgtccgg
gttaacctgtctttcgtgaaaaacgaaccactgcctccttcatatcttcgttctcccttt
gatcattctcatcacaggtttcctcacaccattccccccgtctga
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