KEGG   Magallana gigas (Pacific oyster): 105322898
Entry
105322898         CDS       T03920                                 
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03420  Nucleotide excision repair
crg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105322898
  09124 Replication and repair
   03420 Nucleotide excision repair
    105322898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crg04121]
    105322898
   03400 DNA repair and recombination proteins [BR:crg03400]
    105322898
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crg04147]
    105322898
Ubiquitin system [BR:crg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     105322898
DNA repair and recombination proteins [BR:crg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      105322898
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      105322898
Exosome [BR:crg04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105322898
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW Nnf1
Other DBs
NCBI-GeneID: 105322898
NCBI-ProteinID: XP_065926459
UniProt: A0A8W8IR11
LinkDB
Position
8:19259271..19273709
AA seq 807 aa
MPLSNTNKPNLQDEQKLDGDENRKKRKLSEGISPPNHKRARENIDESQMTDSQRRANFSA
ISSPSNGLNKHVSPLANNKPGATKKLVIKNFREKPRLPENFQQQTWEKLKESVEAIQRST
SIRWSLEELYQAVENMCSHKMSAQLYDQLKEVCDKHVRCNVEQFKTENVGFEQFLKNVDG
CWQAHCRQMIMIRSIFLFLDRTYVLQTSSVMSIWDMGLELFRTHVMFHPLVQKRTVDGIL
QLIKRERTGEAVDRQLIKSLLRMLSDLQMYVDAFEHSFLEATESLYAAEGQQLMQERDVP
EYLAYVDKRLHEEMERLLHYLDMSTKKPLVSCVEKQLLEKHLTQILQKGLDQLLTENRIK
DLTLMYQLFSRVKDGLKEMCTAFATYIKVTGKTIVMNPDNDAEKDKDMVQNLLDFKDKMD
NVIDVCLSKNEKFVNALKESFETFINQRQNKPAELIAKYVDTKLKAGNKEATEEELERLM
DKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGAAFTSKLEG
MFKDMECSKDFNLSFKQHMQHVDSPGGIEMTVNILTMGYWPTYTPMEVHLPASMVKLQEI
FKTFFYSKHSGKKLQWQSTLGHCVLKAKFAGGEKKELQVSLFQTLCLLLFNDGDEFSFEE
IKTATAIEEGELKRTLQSLACGKARVLLKNPKGKDVENGDKFLFNGGFKHKLCRIKINQI
QMKETPEENTTTTERVFQDRQYQVDAAIVRIMKTRKTLTHNLLISELYNQLKFPVKPADL
KKRIESLIDRDYMERDKENQNQYHYVA
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgcctctctcaaatactaataaaccaaatctgcaggacgagcagaagttggacggcgac
gaaaaccggaagaagcgtaaattgagcgagggcatatcacccccaaatcacaaaagggct
cgtgaaaatattgacgaatcgcagatgactgactcacagagaagagccaatttctctgct
atctcaagtccaagcaacggactcaataaacatgtgtcgccactggctaataataaacca
ggagcgactaagaaactagtgatcaagaacttcagagaaaaacccagacttccagagaat
ttccagcagcagacatgggagaagttgaaggagtctgtggaggccatacagaggagtacg
tcgattcgctggagtctggaggagctgtatcaggccgtggagaacatgtgctcccacaaa
atgtccgcccagctgtacgaccagctgaaggaagtctgtgataaacatgtacgctgcaac
gtggaacagttcaaaactgaaaatgttggatttgagcagttcctgaagaatgtggatggt
tgttggcaagctcattgccgtcaaatgattatgataaggagtattttcctgttcttggac
agaacctatgtgttacagacctcatctgttatgtcaatatgggacatgggtttggaattg
ttccggacacacgtcatgttccacccactggtacagaagagaacagtggacggcattcta
cagctgataaaaagggagagaactggggaagctgtggaccgacagctgatcaagagtctg
ctcaggatgttgtctgacttacaaatgtatgttgatgcctttgagcactcgttcctggaa
gccacagaaagtctgtatgcagccgagggccagcaactgatgcaggagagagatgttcca
gagtacttggcctatgtggacaaaagactccatgaagaaatggagagattgctacattac
ctcgacatgtctaccaaaaaaccacttgtcagctgtgtggagaaacagctgctggagaaa
catttaacacaaatactccaaaagggtttggaccagctgttgacagagaacagaatcaag
gatttgaccttgatgtaccagttgttttccagagtcaaagatggcctcaaggaaatgtgc
actgcttttgccacttatatcaaggtaacaggtaaaaccattgtgatgaacccggacaat
gatgccgagaaggacaaggacatggtccagaacttgctggatttcaaggacaagatggac
aacgttatagatgtgtgtttgtctaagaacgagaagtttgtcaacgccctgaaagagagc
tttgaaacctttatcaatcaacggcagaataaaccggcggaattaatcgccaagtatgta
gataccaaactgaaggctggaaataaggaagccactgaagaggaattagagcgactgatg
gataaaatcatggtgctatttaggtttatacacggcaaagatgtgtttgaggcattctac
aaaaaggatctggccaagcgcctcttggtaggaaagagtgcttctgtggatgctgagaaa
tcaatgttatccaaactcaagcaagaatgtggagcagcttttaccagcaagctagaggga
atgttcaaggacatggaatgttccaaagatttcaatttgtctttcaaacagcacatgcag
catgtggacagtcccggaggcattgagatgacagtcaatattctcaccatgggttactgg
cctacttacacccccatggaggtccatctgcctgcatctatggtgaagctacaggaaata
ttcaagaccttcttctatagtaaacacagtggaaagaagttgcaatggcagtccaccctg
gggcactgtgtcttgaaagcaaagtttgccgggggagagaagaaggagctacaggtttct
ctgttccaaaccctctgtcttctgctgttcaatgatggagatgagttttctttcgaggaa
attaaaacagccactgctattgaggaaggtgaactgaagagaaccttacagtcccttgcc
tgtggcaaagccagggtccttctgaaaaatccaaagggcaaggatgttgagaatggagac
aaattcttgttcaacggtggatttaaacacaaactctgtcgtatcaagatcaaccaaatt
cagatgaaagaaacaccggaggagaacacgacaaccacagagcgagtgttccaggaccga
cagtatcaagtggacgctgccattgtcagaataatgaagaccaggaaaacactaacccac
aacctcctgatctcagaactgtataaccagctcaaattccctgtcaaacctgcagacttg
aagaaaagaatagaaagtttgattgatagagactatatggaaagagacaaagaaaatcaa
aatcagtatcactatgtggcttga

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