Magallana gigas (Pacific oyster): 105322922
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Entry
105322922 CDS
T03920
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04136
Autophagy - other
crg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105322922
04136 Autophagy - other
105322922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105322922
03029 Mitochondrial biogenesis [BR:
crg03029
]
105322922
Membrane trafficking [BR:
crg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105322922
Atg1 complex
105322922
Mitochondrial biogenesis [BR:
crg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105322922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
105322922
NCBI-ProteinID:
XP_019920668
UniProt:
A0A8W8L2E5
K1QIF8
LinkDB
All DBs
Position
2:23401512..23409139
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AA seq
474 aa
AA seq
DB search
MSKLSQQDRKDLEKFTKFLIYKSLQIIVQSRLGEKIQAKSKPFSSGADWFNLAIKDIAEV
HNETKKALVSQTALLSQNVCVEISLKTSEGDSMVLETWYIGLNKETCDVNARISYTVYNR
MGIALKTLFSISRVTPAYKLSRQQGANADEYVICYRFYQGDPQFFMLGDNYQTIKVGSVP
TPVGTIYINLAYRTKLLITPQKSCKAIPIEVKDDHFKKDNSPRRPTTPKPCSLGFRRNST
SEDLFGDGVDGQDLCSTTFDNSPGEAFLLGMTQHGLVPPNIQQKTALKTDNRENNEAPKK
QENVEKQLSFTSYQKVGAFAQNRNSKEINNTDLEDVPFLNLLQAEGKSEVKMTVQRELQN
DIESNEQVSSNKSEEEKSLEQALSPSESISSNTSAPDDFVMVELKTPFAGADPNQDLGKF
YRECQGAPQLTMCSGETNVTEALAEISSQIQMFESNIEGFDDFVTSITESVTVE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaactaagtcaacaagacaggaaagacttggagaaatttactaaatttttgatt
tataaaagtctacaaataattgtgcaatcaaggctaggggagaagatccaagcaaagtct
aaaccattttcttcaggagcagattggtttaacctggccataaaagatatagctgaagtg
cataatgaaacaaagaaggctttagtcagtcagacagctctattaagtcaaaatgtttgt
gtggaaatttctctcaagacatcagaaggggactccatggtactggaaacctggtacata
ggattgaacaaagagacttgtgatgtaaatgccaggatctcatacacagtatacaatcga
atgggtattgcactaaagacattgttcagtatttccagagtcactccagcgtacaaactt
tcccgacagcaaggagctaatgctgatgagtatgtgatatgctaccggttttaccaagga
gatccccagtttttcatgctaggagacaattatcagactataaaggttggttctgtgcca
acacctgttgggaccatctacatcaatctggcatacagaacaaaactattaataacacct
caaaaatcctgcaaggcaattcccattgaagtgaaggatgatcattttaagaaagacaac
agtccaagacgaccaactactcccaaaccatgctcattgggctttagaagaaacagtaca
tcggaggatttgtttggggatggtgttgatggacaagacctgtgttccaccaccttcgac
aacagtccaggggaagccttcctcctcggcatgacacagcacggactggtgccacccaac
atacagcagaagacagccctcaaaacagacaacagggagaataatgaggctcccaaaaaa
caggaaaatgttgaaaagcagctcagtttcacttcgtaccaaaaagttggggcatttgct
cagaatagaaattccaaggaaatcaacaatactgacttagaagacgtaccattcctaaac
ttgctgcaagcggagggcaaatctgaagttaagatgacagtgcaaagagaactgcaaaat
gatatcgaatctaatgaacaagtctccagtaataagtcggaggaagaaaaaagtttggaa
caggccctatcaccctcagaaagtatatctagtaacacatctgccccagatgactttgtt
atggtggaattgaaaaccccatttgctggagcagatccaaaccaagacttggggaaattt
tatagagaatgtcaaggggctccacagctgactatgtgtagtggtgaaaccaatgtcacg
gaggcactagcagaaatttctagtcagatacaaatgttcgagtccaacatagaaggattt
gatgactttgtcacttctatcactgaaagtgttactgtggaatag
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