Magallana gigas (Pacific oyster): 105322944
Help
Entry
105322944 CDS
T03920
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105322944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crg02000
]
105322944
Transporters [BR:
crg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
105322944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
105322944
NCBI-ProteinID:
XP_034336023
LinkDB
All DBs
Position
3:37884942..37922603
Genome browser
AA seq
633 aa
AA seq
DB search
MSKETNVDTGVQENEPALLDSESNSSELPERALWSRKIEYLLSLFGYSVGLGNIWRFPYL
CMRNGGGAFLIPFFICLIFCAVPLYLLEVSLGQFTGKSPVIVWSICPLFKGLGWLMMTIS
FIITWYYNLVMSWVIYYFVHAFFPKIPWSTCDNWWNTDHCIVSHKDRLTLNKTADGVNQS
FAGLLANESTISYKYNTTYVNRSSTYNTAAYEFWEFNVLRSSKGIEELGSVQWHLVLVLL
ASWVLTFCCLIKGVRSLGKVVYVTVILPYILLTVILIRGLTLDGSTDGILFYIKPDFSKV
FNFQVWLEAGMQVFYSLGVAWGGVITMSSYNRFTNQCIKDAWMGTLADGLTSFYAGFVVF
SILGFMAKDVGLTMEEISISATGPGLVFVAYPEALMKLPMPHLWGVLFFFMLIAVGVDSQ
FANVETVSSGVADIFPKQLNSHRVLLTAFLCTIFFVLGIPLTTNGGIYIFQLIDWYAASL
CITFAALSECIIISWIYGAERFNRDIEMMIGKSIPLIMRIGWCLITPIFMLALFLTICAK
YGPPNSASYTYPDFAIAIGQFFALLPMLPVPIAIIWGLVHSEGTFLQRIKTLARPDSSWG
PNNKRHWQTYKVYEYRGGVVDRIRVNLLGDRRR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggaaacaaatgttgacacaggtgtccaggaaaacgaaccagcgttgctagat
tctgaatccaattcatcagaactgccggaaagagcactatggagtcggaaaattgagtac
cttctgtctctctttggctacagtgttggactcggcaatatctggaggttcccctacctt
tgcatgagaaatgggggaggtgcatttctcatcccttttttcatctgtctgatcttttgc
gcagtccctctgtatcttctggaggtatccctgggacagtttacaggaaagagtccagtg
atagtgtggtccatatgtcctctttttaaaggactcggttggcttatgatgacaatctcc
tttattattacctggtattacaacttggtgatgtcttgggtcatttattattttgtccat
gcattcttccccaagattccatggtcaacgtgtgataactggtggaacacggatcactgc
atcgtcagccataaggacagactgacactgaataaaaccgctgatggagtcaatcaatcc
ttcgcaggactgctggcaaacgagtctactatttcctacaaatacaacactacttatgtt
aatcgaagttcgacttataatacggcagcatacgagttttgggagtttaatgtgctgagg
agttccaaaggcattgaagagctgggttctgttcaatggcatctggttttggtgttactt
gcctcctgggtcttaacattttgttgtttaattaaaggcgtgcgttcgctaggaaaggtt
gtatatgtgacggtcattttaccgtacattctcctgacagtcattcttatacgaggtttg
acgctagatggctcaacagatgggattcttttttacataaagcctgacttttccaaagtt
ttcaattttcaagtgtggttggaggcaggtatgcaagtattttattcgcttggcgtggcc
tggggtggggtcattacaatgtccagttacaatcgtttcaccaaccagtgtattaaggat
gcgtggatgggtactttagctgacgggctgacgagtttctacgctgggtttgttgttttt
tccattctgggatttatggctaaagatgtaggccttacaatggaagaaatttctatatca
gcaactggaccgggacttgtgtttgttgcgtacccggaagcactgatgaaactaccgatg
ccccatctgtggggagtgctgtttttctttatgttgattgcggttggcgtggacagtcag
tttgcgaatgtagagacggtttctagtggtgtggctgacatatttccaaagcaactgaat
tcacacagagttcttttaacggcatttttgtgtactattttctttgtgttgggaattcct
ttaacaacaaacggtgggatttacatattccagctgatagattggtacgctgcaagttta
tgcattacgtttgcggccctctcagagtgtatcataatatcctggatctacggcgcagaa
cgttttaatcgggatatagagatgatgatagggaaatcaatccccttaataatgagaatc
ggctggtgcttgattactccgattttcatgttggccctcttcttgacaatatgtgccaag
tacggtcctcccaactcggctagctacacgtatcctgacttcgccattgccatcggccag
tttttcgcccttctaccaatgttaccggttcctattgcgataatttggggactcgttcat
tctgaaggaacatttctgcagaggattaaaacccttgctcgtccggattcaagctggggg
cccaacaacaaacgacactggcagacgtacaaagtgtatgaatacagaggaggcgttgtg
gacagaatccgggtcaatttgctgggggaccgtcgccgatag
DBGET
integrated database retrieval system
