Magallana gigas (Pacific oyster): 105322958
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Entry
105322958 CDS
T03920
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03018
RNA degradation
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105322958
09123 Folding, sorting and degradation
03018 RNA degradation
105322958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105322958
03041 Spliceosome [BR:
crg03041
]
105322958
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105322958
mRNA degradation factors
5'-3' decay
Lsm complex
105322958
Spliceosome [BR:
crg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105322958
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105322958
NCBI-ProteinID:
XP_011420171
UniProt:
K1RHV4
LinkDB
All DBs
Position
6
Genome browser
AA seq
79 aa
AA seq
DB search
MSRKQTPSEFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYG
DAFIRGNNVLYISTQKRRA
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaaaacagacacctagcgagtttttgaagcaaatcattggacgcccagtggtg
gtcaaattgaactctggggttgattacagaggtgtactggcttgtctagacggctacatg
aacattgccttggaacagactgaggagtacgtcaacggacagttaaagaacaaatatggc
gacgcattcatcaggggcaataatgttctgtacatcagcacacagaagagaagagcatga
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