Crassostrea gigas (Pacific oyster): 105323586
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Entry
105323586 CDS
T03920
Name
(RefSeq) ribonuclease P protein subunit p30 isoform X1
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105323586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105323586
03016 Transfer RNA biogenesis [BR:
crg03016
]
105323586
03029 Mitochondrial biogenesis [BR:
crg03029
]
105323586
Enzymes [BR:
crg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
105323586
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
105323586
Transfer RNA biogenesis [BR:
crg03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
105323586
Mitochondrial biogenesis [BR:
crg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
105323586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
DUF3867
Motif
Other DBs
NCBI-GeneID:
105323586
NCBI-ProteinID:
XP_034304630
LinkDB
All DBs
Position
LG8:complement(39370572..39376444)
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AA seq
290 aa
AA seq
DB search
MSYADLSVLNCDRKTLLEKVGVAVKLGYEVIALDIVHTPSKNATKKKKKQKDSNPQASEG
VIKASTLKLTEDELKDLQVDSKRVKILSRVTLNVTDSEQLQYLMSPEVQEYDIVAVRPTS
SDIFTKVTKYINLDIIQLEMDKNVKIITPGGLSEGIQKGIHFEIQYGPAIRDSSVKKYLI
SNSQLLASFSKSKNIIISSGAERAIELRGPHDVANLGLLFGLNEAQAKNCVSRSCRSVLL
HAEERRALKATVALSSGDLSDDQKWVKDKLSEIHSQDTTGESSPKKRKLE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgccgatctgagtgtgttaaattgcgacaggaaaacattgctagaaaaagtt
ggtgtggcagtaaaacttggatatgaagttattgctttagacatcgtccatacaccgtca
aagaatgctacaaaaaagaagaaaaagcaaaaagattccaatccacaggctagcgaggga
gtgataaaagcaagcacattgaaactgacagaggatgaattaaaagatctccaggttgac
agtaaacgagtaaagattctgagccgggtgacgttgaatgtcacagacagtgaacagttg
cagtatctgatgtcacccgaggtacaggagtatgacattgtagctgttcgacccacatca
tccgatattttcactaaagttacaaaatacatcaacttagacatcattcaactggaaatg
gataaaaatgttaaaattatcacacctggaggcttgagtgaaggaatacaaaaggggatt
cattttgagattcaatatggccccgcgatccgggacagctctgtcaagaaatatctcatc
tctaactcacagctgctagccagttttagcaaatcaaaaaacatcattatttccagtgga
gctgagagagcaatagagctgagaggaccccatgatgtagcaaatttaggcctactgttt
ggactgaatgaagctcaggccaagaactgtgtcagcaggagctgtaggagtgtgctacta
catgcagaagaaagacgagccttgaaagctacagtagccctatcatcaggtgacctttcg
gacgatcagaagtgggtaaaggacaaactgagtgagatccactcccaggatacaactgga
gaatcctccccaaagaaaaggaagcttgagtga
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