KEGG   Magallana gigas (Pacific oyster): 105323590
Entry
105323590         CDS       T03920                                 
Name
(RefSeq) exodeoxyribonuclease
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105323590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crg03400]
    105323590
Enzymes [BR:crg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     105323590
DNA repair and recombination proteins [BR:crg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     105323590
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-GeneID: 105323590
NCBI-ProteinID: XP_011420949
LinkDB
Position
9:complement(35540516..35549619)
AA seq 381 aa
MLNILPWHRILFSNFVRGASRISHRVLSSSDKMPPKRKAKKDDGKTPAPEEGSVWDTAQE
DKPSPSKKQKVDEEEKGKKGKGGKGKKAPPRKEDTIETLPEGTDTSFPTEVNPEAKTTDG
RKFTLKIASWNLNGIRAWYDKDKMSYIKESSPDILCVQETKCQEDQLPPGVLDKDYHIYW
SPAEKAGYAGTGLYSKKKPIKVTYGLGIPKHDDEGRVITAEYEDFYMVNAYVPNSGKGLV
RLKYRTEQWDCDFTDYLKKLDAKKPVIMCGDLNVSHTPVDLKNPTSNRNKTPGYTDKERE
GFSKLLEEGFLDSFRVLYPNARDCWSFWTYMMNARAKNIGWRLDYFVISKRLQKDLCDSI
IQQKVMGSDHCPIMLLMAGLK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgctgaatatcttgccgtggcatcgaattttgttttccaattttgtaaggggtgcttcg
aggataagtcatagagtattgtcttcgtctgacaaaatgccacccaaaagaaaggcaaag
aaagatgatggaaagacccctgctccagaggaaggcagtgtatgggacacagctcaagag
gataagccatcacccagcaaaaagcagaaagtagatgaagaagaaaaaggaaagaaaggt
aaaggagggaagggaaagaaagctccgcccaggaaggaggacaccattgagaccctccct
gagggaacagacacctcattcccgaccgaggttaaccccgaggccaagaccacagatgga
cggaagttcaccctcaagattgcctcatggaacttaaatggaatccgggcgtggtatgat
aaagacaagatgtcgtacatcaaggagtcgtcgccggacatcttatgtgtacaggagacc
aagtgtcaggaggatcagctacccccgggggtgctggacaaggactaccacatctactgg
tcgcctgccgagaaagcgggctacgctggcactggactctacagcaagaagaagcccatc
aaggtcacctacgggcttggtattcccaagcatgatgatgaagggagggttatcactgcc
gagtatgaagacttctacatggtgaatgcatatgtgccaaattctggtaaaggtttggtt
cgtctgaagtataggacagagcagtgggactgcgacttcactgattacctaaagaagctg
gacgccaagaagccagtcatcatgtgtggggacctcaacgtgtcccacactcctgtagat
ctaaagaacccgaccagcaacaggaacaagacgccgggctacacggacaaggagagggag
ggcttcagtaagctgcttgaggagggcttcctggactcgttccgcgtcctctaccccaac
gcccgcgactgctggtccttctggacctacatgatgaacgcccgtgccaaaaatattggc
tggcggctggattactttgtgatctccaagagactccagaaggacctgtgtgacagcatt
atccaacagaaggtcatgggtagcgaccactgtccaatcatgttactgatggcggggctc
aagtaa

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