Magallana gigas (Pacific oyster): 105323733
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Entry
105323733 CDS
T03920
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03013
Nucleocytoplasmic transport
crg03015
mRNA surveillance pathway
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105323733
09122 Translation
03013 Nucleocytoplasmic transport
105323733
03015 mRNA surveillance pathway
105323733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105323733
03041 Spliceosome [BR:
crg03041
]
105323733
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
105323733
Spliceosome [BR:
crg03041
]
Common components
Common spliceosomal components
Cap binding complex
105323733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
105323733
NCBI-ProteinID:
XP_011421116
UniProt:
K1QUF8
LinkDB
All DBs
Position
9:47124091..47127844
Genome browser
AA seq
162 aa
AA seq
DB search
MSGFRAKFPSGSVALSAYRDQHFKGSRTEQEKALLTSSTLYVGNLSYYTTEEQIHELFGK
CGDIKRIVMGLDKVKKTPCGFCFVEYYTREEGEYAMRYVNGTRLDDRIIRTDWDHGFKEG
RQYGRGKSGGQVRDEYRTDYDEGRGGYGKIIATKITQSRDPM
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatttcgggccaagtttccctcaggatcggttgccctcagcgcctacagagac
cagcacttcaagggaagtcgaacagaacaagagaaggctctcctgacatcttccacgctg
tacgttggaaacctgtcatattacacaacagaagaacaaattcatgaacttttcggcaaa
tgcggagacatcaaaagaatcgtcatgggtttagacaaagtgaagaaaacgccctgtggt
ttttgctttgtggaatattacaccagggaagaaggggagtacgcaatgaggtacgtcaac
gggacacggttggatgaccgcatcattcgtacggactgggaccacgggttcaaggagggt
cggcaatacggcagggggaagagcggaggacaggttcgagacgaatacagaactgactac
gacgaggggcggggaggatacgggaaaatcatcgctaccaagatcacccagtcccgcgac
cccatgtga
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