KEGG   Magallana gigas (Pacific oyster): 105323847
Entry
105323847         CDS       T03920                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    105323847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:crg03009]
    105323847
Ribosome biogenesis [BR:crg03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    105323847
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Utp13 Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_DCAF4 WDR90_beta-prop_4th NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_Nup120_160 WD40_like Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_SPT8 Cytochrom_D1 Beta-prop_WDR35_TULP_N Pox_TAP UTP15_C Hira
Other DBs
NCBI-GeneID: 105323847
NCBI-ProteinID: XP_065923784
LinkDB
Position
7:complement(49960395..49969288)
AA seq 1018 aa
MTQLKENFAVETKYEPFYTGGKIFISNDGTCMFCGCGNKIHIIDVNSGQTKYTLSQEEDE
EITHFCLSPNNEFLVAATKHLVLRQWNWKDQVLIRSWKAIHISPVLTMDFDVSSTLLASG
SSDTTIKLWDIDKQYCTHNLKGHTGVISIVKFHPDNEKLQLFSAADDYKVKVWDLRTSKC
LMTVEAHYSVVTSMVFSPDNTTMYSGGRDRIVSVWDVGELKVTKAIPVFESVEAVILLPQ
NQEFPDLGITEQEGPHIITAGSKGTLRVWNIEKAKCVYVRKELIGRASDNEEENQNITQA
LHSEALQSLAVVTFDNNITMCKLQDLSVSKQFCGNTDQVLEVQFLGPNDSHLAVATNSEH
LKVFEVATWNCQLCSGHTDIILGVTVHRKRNLLATCSKDNTVRVWKFDPDSGKVSCVGVG
HGHTHIVGTVAISSVTASWMVSGGQDFTLKKWQLPKTGEESCKDLKCIHTERVHEKDINC
VVMSPNDKFIATGSHDRTAKLWNAETFALVGVMRGHKRGVWCVQFSPVDQCIATSSGDGT
IKIWSIQGLECVKTFEGHDSAVLRVTFINRGMQLLSCGSDGLMKLWVIKSNTCVSTMDEH
EDKVWSVTVNKEEDHIVTGGADSSIILWKDVTGEEVQKKQTEREDFILKEQQLSNLLHKK
KYLRAIGLAITLEQPFRVLSIIKEILYNPDGKTELEKTLQKLRVDQIDSVLRFAGEWNTN
SRHCHEAQFVLNTVFKTYPPEEILKFPNIKSTMEAFIPYTERHFQRMNRLLQQAMFLEFT
WSCMRRVTDNTQSVENKQGFRSVEGLPENESDMKIRNHSSGGESDSDDSMDTEDNDEKDR
ETEESANEDNDSVHGSESDDGSKSTESSASDGEQAESDIENIKPAALSGGERLTGSHRGS
TRSSQDEGSDSESSEGEPLVFSSQNTKSLENLKGSEKVMSSKKKSQQNSNVQNTPINKQT
TEVKSRKRAQTESDPEELETGEKRARGLRSSQTEAETNSAKRLKQPLTRSMLKKQKGR
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgacacaacttaaagagaattttgctgtggaaacaaagtatgaacctttttacactgga
gggaaaatctttatttccaatgatgggacatgcatgttttgtggatgtggaaacaaaatc
cacattattgatgtaaattcagggcaaaccaaatacactttatcccaggaggaagatgaa
gaaataacccatttctgtctgtctccaaacaatgagttcttagttgctgccaccaaacat
ttagttttgaggcagtggaactggaaagatcaagttctaattaggtcatggaaggctatt
cacatatctcctgttttgactatggactttgatgtttcctctacattgttggcatcagga
agttctgacacaacaattaaactgtgggatattgataaacagtattgtacacacaatctt
aaaggtcatactggggttataagcatagtaaagttccaccctgacaatgagaagttacag
cttttttctgctgcggatgactacaaggtcaaggtctgggacctgaggaccagtaaatgt
ctgatgacggtggaggcgcactacagcgtggtcaccagcatggtcttctcacctgacaat
acaacaatgtacagtggggggcgagatcgaatagtgtctgtgtgggatgtaggggagctg
aaggtcaccaaggccatcccagtgtttgagagtgtggaagcagtgatcttgttgcctcaa
aatcaggagtttcccgaccttgggatcactgagcaggaaggcccacacatcatcacagct
ggcagtaaaggaactttacgtgtgtggaatattgaaaaagcaaagtgcgtgtatgtaagg
aaagagctgattggtcgagccagtgacaatgaggaagagaatcaaaacatcacccaggca
ctacacagtgaggccctgcagagtctggctgtggttacctttgataacaacatcaccatg
tgtaaattacaggatctgtctgtcagtaaacagttttgtggcaacacagaccaggtgttg
gaggtgcagtttctaggacccaatgattctcacttggctgtggccacaaatagtgagcac
ctcaaagtatttgaggtcgcgacctggaactgtcagctgtgctctggtcatacggacatc
attcttggggttacggttcacaggaagagaaatctgctggccacttgttcaaaggacaat
acagtaagagtatggaaatttgacccagattctgggaaggtcagctgtgttggagttggg
catggtcacacacacatagtaggcactgtggctatttccagtgtaacagctagttggatg
gttagtgggggccaagatttcactctgaagaagtggcagctccccaaaaccggggaagaa
tcctgtaaggacctgaagtgtatccacacagagagggttcatgagaaagatattaactgt
gttgttatgtctccaaatgacaaattcatagcaacagggtcacatgatcgcaccgcaaag
ctttggaatgctgaaacttttgctctagttggagtgatgagaggccacaagaggggagtc
tggtgtgttcagttctcacctgttgaccagtgtatagcaacctcatcaggagacggaaca
atcaaaatttggtcaatacaaggcttagaatgtgtcaagacttttgagggacatgacagt
gctgtactgagagtaacttttatcaacaggggcatgcaactcctatcctgtggctcagat
ggcctgatgaagctttgggtgataaaatccaacacttgtgtatctacaatggatgaacac
gaggacaaggtttggtcggtcacggtcaataaggaggaggatcacattgtgactggagga
gcggactccagtatcattctgtggaaggatgtaacaggagaggaggtacagaagaagcaa
actgagagagaggatttcattcttaaagaacaacagctgagtaatttacttcacaagaag
aaatatctgagagccattggtctggccattacactggagcagccattcagagtgttgagc
atcatcaaagaaatcctgtacaatcctgatgggaaaacagaactggagaaaactcttcaa
aagctcagagttgatcagatagattcagtgctgcgttttgctggagaatggaataccaac
agcagacattgtcatgaggctcagtttgtcctcaacacggttttcaagacataccctcca
gaggagatcctcaaattccccaacatcaagtccaccatggaggcatttattccgtacaca
gagcggcatttccagaggatgaatcgcctgttacaacaagccatgtttttggagttcact
tggagttgtatgagaagggtcacagataatacacagtcagttgagaataagcaaggattc
agatcagtggagggattaccagaaaatgaatcggatatgaagatcagaaatcattcttct
ggaggtgaatcagacagtgacgattccatggatacagaagacaatgatgaaaaagaccgt
gaaacagaagaaagtgctaatgaagacaatgatagtgttcatgggagtgagtcagacgat
gggtctaaatccactgaaagctctgctagtgatggagagcaagcagagtcggacattgag
aatattaaacctgctgccctgtcaggaggggagcggttgactggttctcatcggggcagc
acccgttcatcacaggacgagggttctgactccgagtccagtgagggagagcctctggtt
ttctccagtcaaaacacaaagagtttggaaaatttaaagggcagtgagaaagtgatgtcc
agtaagaaaaaatctcaacaaaatagtaatgtacagaataccccaattaataaacagaca
acagaggtaaaaagcagaaaaagggcacagacagaatctgatcctgaggagctggagact
ggcgagaaacgtgcaagaggactgagatccagccagacagaggctgaaacaaacagtgca
aaaaggttaaagcaacccctaactaggtcaatgttaaagaaacagaaagggagataa

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