Magallana gigas (Pacific oyster): 105323847
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Entry
105323847 CDS
T03920
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105323847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105323847
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105323847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Utp13
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_DCAF4
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
WD40_like
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_SPT8
Cytochrom_D1
Beta-prop_WDR35_TULP_N
Pox_TAP
UTP15_C
Hira
Motif
Other DBs
NCBI-GeneID:
105323847
NCBI-ProteinID:
XP_065923784
LinkDB
All DBs
Position
7:complement(49960395..49969288)
Genome browser
AA seq
1018 aa
AA seq
DB search
MTQLKENFAVETKYEPFYTGGKIFISNDGTCMFCGCGNKIHIIDVNSGQTKYTLSQEEDE
EITHFCLSPNNEFLVAATKHLVLRQWNWKDQVLIRSWKAIHISPVLTMDFDVSSTLLASG
SSDTTIKLWDIDKQYCTHNLKGHTGVISIVKFHPDNEKLQLFSAADDYKVKVWDLRTSKC
LMTVEAHYSVVTSMVFSPDNTTMYSGGRDRIVSVWDVGELKVTKAIPVFESVEAVILLPQ
NQEFPDLGITEQEGPHIITAGSKGTLRVWNIEKAKCVYVRKELIGRASDNEEENQNITQA
LHSEALQSLAVVTFDNNITMCKLQDLSVSKQFCGNTDQVLEVQFLGPNDSHLAVATNSEH
LKVFEVATWNCQLCSGHTDIILGVTVHRKRNLLATCSKDNTVRVWKFDPDSGKVSCVGVG
HGHTHIVGTVAISSVTASWMVSGGQDFTLKKWQLPKTGEESCKDLKCIHTERVHEKDINC
VVMSPNDKFIATGSHDRTAKLWNAETFALVGVMRGHKRGVWCVQFSPVDQCIATSSGDGT
IKIWSIQGLECVKTFEGHDSAVLRVTFINRGMQLLSCGSDGLMKLWVIKSNTCVSTMDEH
EDKVWSVTVNKEEDHIVTGGADSSIILWKDVTGEEVQKKQTEREDFILKEQQLSNLLHKK
KYLRAIGLAITLEQPFRVLSIIKEILYNPDGKTELEKTLQKLRVDQIDSVLRFAGEWNTN
SRHCHEAQFVLNTVFKTYPPEEILKFPNIKSTMEAFIPYTERHFQRMNRLLQQAMFLEFT
WSCMRRVTDNTQSVENKQGFRSVEGLPENESDMKIRNHSSGGESDSDDSMDTEDNDEKDR
ETEESANEDNDSVHGSESDDGSKSTESSASDGEQAESDIENIKPAALSGGERLTGSHRGS
TRSSQDEGSDSESSEGEPLVFSSQNTKSLENLKGSEKVMSSKKKSQQNSNVQNTPINKQT
TEVKSRKRAQTESDPEELETGEKRARGLRSSQTEAETNSAKRLKQPLTRSMLKKQKGR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacttaaagagaattttgctgtggaaacaaagtatgaacctttttacactgga
gggaaaatctttatttccaatgatgggacatgcatgttttgtggatgtggaaacaaaatc
cacattattgatgtaaattcagggcaaaccaaatacactttatcccaggaggaagatgaa
gaaataacccatttctgtctgtctccaaacaatgagttcttagttgctgccaccaaacat
ttagttttgaggcagtggaactggaaagatcaagttctaattaggtcatggaaggctatt
cacatatctcctgttttgactatggactttgatgtttcctctacattgttggcatcagga
agttctgacacaacaattaaactgtgggatattgataaacagtattgtacacacaatctt
aaaggtcatactggggttataagcatagtaaagttccaccctgacaatgagaagttacag
cttttttctgctgcggatgactacaaggtcaaggtctgggacctgaggaccagtaaatgt
ctgatgacggtggaggcgcactacagcgtggtcaccagcatggtcttctcacctgacaat
acaacaatgtacagtggggggcgagatcgaatagtgtctgtgtgggatgtaggggagctg
aaggtcaccaaggccatcccagtgtttgagagtgtggaagcagtgatcttgttgcctcaa
aatcaggagtttcccgaccttgggatcactgagcaggaaggcccacacatcatcacagct
ggcagtaaaggaactttacgtgtgtggaatattgaaaaagcaaagtgcgtgtatgtaagg
aaagagctgattggtcgagccagtgacaatgaggaagagaatcaaaacatcacccaggca
ctacacagtgaggccctgcagagtctggctgtggttacctttgataacaacatcaccatg
tgtaaattacaggatctgtctgtcagtaaacagttttgtggcaacacagaccaggtgttg
gaggtgcagtttctaggacccaatgattctcacttggctgtggccacaaatagtgagcac
ctcaaagtatttgaggtcgcgacctggaactgtcagctgtgctctggtcatacggacatc
attcttggggttacggttcacaggaagagaaatctgctggccacttgttcaaaggacaat
acagtaagagtatggaaatttgacccagattctgggaaggtcagctgtgttggagttggg
catggtcacacacacatagtaggcactgtggctatttccagtgtaacagctagttggatg
gttagtgggggccaagatttcactctgaagaagtggcagctccccaaaaccggggaagaa
tcctgtaaggacctgaagtgtatccacacagagagggttcatgagaaagatattaactgt
gttgttatgtctccaaatgacaaattcatagcaacagggtcacatgatcgcaccgcaaag
ctttggaatgctgaaacttttgctctagttggagtgatgagaggccacaagaggggagtc
tggtgtgttcagttctcacctgttgaccagtgtatagcaacctcatcaggagacggaaca
atcaaaatttggtcaatacaaggcttagaatgtgtcaagacttttgagggacatgacagt
gctgtactgagagtaacttttatcaacaggggcatgcaactcctatcctgtggctcagat
ggcctgatgaagctttgggtgataaaatccaacacttgtgtatctacaatggatgaacac
gaggacaaggtttggtcggtcacggtcaataaggaggaggatcacattgtgactggagga
gcggactccagtatcattctgtggaaggatgtaacaggagaggaggtacagaagaagcaa
actgagagagaggatttcattcttaaagaacaacagctgagtaatttacttcacaagaag
aaatatctgagagccattggtctggccattacactggagcagccattcagagtgttgagc
atcatcaaagaaatcctgtacaatcctgatgggaaaacagaactggagaaaactcttcaa
aagctcagagttgatcagatagattcagtgctgcgttttgctggagaatggaataccaac
agcagacattgtcatgaggctcagtttgtcctcaacacggttttcaagacataccctcca
gaggagatcctcaaattccccaacatcaagtccaccatggaggcatttattccgtacaca
gagcggcatttccagaggatgaatcgcctgttacaacaagccatgtttttggagttcact
tggagttgtatgagaagggtcacagataatacacagtcagttgagaataagcaaggattc
agatcagtggagggattaccagaaaatgaatcggatatgaagatcagaaatcattcttct
ggaggtgaatcagacagtgacgattccatggatacagaagacaatgatgaaaaagaccgt
gaaacagaagaaagtgctaatgaagacaatgatagtgttcatgggagtgagtcagacgat
gggtctaaatccactgaaagctctgctagtgatggagagcaagcagagtcggacattgag
aatattaaacctgctgccctgtcaggaggggagcggttgactggttctcatcggggcagc
acccgttcatcacaggacgagggttctgactccgagtccagtgagggagagcctctggtt
ttctccagtcaaaacacaaagagtttggaaaatttaaagggcagtgagaaagtgatgtcc
agtaagaaaaaatctcaacaaaatagtaatgtacagaataccccaattaataaacagaca
acagaggtaaaaagcagaaaaagggcacagacagaatctgatcctgaggagctggagact
ggcgagaaacgtgcaagaggactgagatccagccagacagaggctgaaacaaacagtgca
aaaaggttaaagcaacccctaactaggtcaatgttaaagaaacagaaagggagataa
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