Magallana gigas (Pacific oyster): 105324267 Help Entry 105324267         CDS       T03920                                  Name (RefSeq) roquin-2 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism crg  Magallana gigas (Pacific oyster) Brite KEGG Orthology (KO) [BR:crg00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:crg03000]     105324267    04121 Ubiquitin system [BR:crg04121]     105324267 Transcription factors [BR:crg03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     105324267 Ubiquitin system [BR:crg04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     105324267 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-CCCH zf-CCCH_UNK zf-C3HC4_4 zf_CCCH_4 zf-CCCH_4 zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-RING_10 zf-C3HC4_2 FYVE Prok-RING_4 Motif Other DBs NCBI-GeneID:  105324267 NCBI-ProteinID:  XP_034301480 LinkDB All DBs Position 2:54237250..54268520 Genome browser AA seq 1126 aa AA seqDB search MSVHLNDRENMPAQAPQWTEFLSCQVCYNVFNETDRRPVSLACGHTVCRTCLLNLPQKKC PFDQCVITRDVNELPVNYALLQLVGAAIPTESEQPAPPIHIPEKTKHYESAKRCIEEIAL YLKPMSDGKEGCLTAANLTSGTNSILSRPMQRKVVALVSCQLVEEEGRARAARAARSLGE RTVTELILQHQNAQQLSSNLWAAVRARGCQFLGPAMQEEVLKLILLALEDGSLLSRKVLV LFVVQRLESQYPQASKTAIGHVVQLLYRASCFKVTKRDEESSLMQLKEEFRSYEALRREH DSQIIQIAMESGLRIAPDQWSSLLYGDTNHKSHMQSIIDKLQTPQSFTQSTNELVVALQR SGDPCNLQRLRPHLEFLASIDPSPDAPTPSWENLEAVMKAVKTVVKGLVDFVQSNGSKKV DNTAYVNVRYKTSMCRDLSEKGRCPRGTNCTFAHSQEELEKFRARNKRSGRNACSASDTS TLTAKQKVQLDQITKTSLEKQRQMSVSSDCAIRDQRLAKDPSSVPVIAGPQDITQGMNSL SMVEHIKTGDSPSMSGPHVHQPSVNFQNMPAQAVQPNVSSMVPPQFQMYPNAQFHPGMVQ PGLYPNGSQVPVGNGAVMMNMQGVGYSDMYQMEVNRGCMQHPSIPSPYPMMQQPQYPGVQ YQQFVPGFFPPSYIPYSQNPGGLQPFVDSRASSSIQGLYTSEPTLVSTSAPSVQEKGYRN ESKLLHNLHSRRKEILAKIQNMPSSSDEMETNSLLTGCTPSSPSVRDIIKDPYKTASDNF MLSTKSTLNKAVSDTVNANTITSLAEVTHKINSWNQDQAYIPWSSGDTALSVWTSSTDTK ASSSEVLTDSGDLWNESSSDSTDFMLNWLKDIPDDPVPVENKEEKWWLTTPTLSEPIYTS ESAVYARSTHCTSSMSVCSDKTDEEIPFDPPIVSKFGPISRSCKTKYKSTDPVQATANQG FSARTPMTATTAVRRPQTTAFPQETKVKKTPEVPMQGYNLQAIPTGCYDKSEMGLQDYVC QELSRLERQAQNAYTEGEALNCELKAVELQISLEDGSMFETPHSKPEKTIFGWELESKLE RPPAAWSSFEMLAAATTKGMKLDDIHMALDAQKKATQTLQRKQQED NT seq 3381 nt NT seq  +upstreamnt  +downstreamnt atgtctgtacatctaaacgacagagaaaatatgccagcccaagctccacagtggaccgaa tttctgtcttgtcaggtgtgttacaatgtcttcaatgagacggatcggcgacctgtcagt ctggcttgtggtcacacagtctgtagaacatgcctgctaaatcttccccagaaaaagtgt ccgtttgaccagtgtgtcatcaccagagacgtcaatgagttgccggtcaactacgctctt ctccagctggttggagctgcaattcccacagagagtgagcagccagcaccaccaatccac atacctgagaaaacaaaacattacgagtctgcaaaacgatgtatagaagaaatagccctg tatcttaagcccatgtctgatggtaaagaaggttgtctaacagctgctaatctaacctcg gggactaatagtattctgagtcggcccatgcagaggaaggttgtcgcccttgtaagctgt cagctcgtggaagaggagggccgggctcgtgctgctcgagcggctcgctcgctgggtgag cgaaccgtgacagaactcatattgcagcatcagaatgctcaacagttgtcatcaaaccta tgggctgcagtgcgtgcccgaggatgtcagtttcttggtcctgctatgcaggaggaagtt ctgaagctgatattactggctctggaggatggttctctcttgtcgcggaaagtgttagtg ctgtttgtcgtgcagcgcctggagtcgcagtatcctcaggcctccaaaactgccataggc catgtggtacagctcttgtacagggcctcctgtttcaaggtgacaaagagagatgaggaa tcctccctaatgcagctcaaggaagagttccgatcttacgaggcattgaggcgtgaacac gactcgcagatcatacaaatcgccatggaatcggggctgaggatcgcgccagaccagtgg tcttctctgttgtatggggatactaatcacaaatcacacatgcagtctattattgacaag ctgcagacaccccagtcatttacccagagcactaatgagttagtggtggccctacagagg agtggggacccatgtaatctacagaggctccgcccacacctcgagttcctggccagcata gaccccagtcccgatgcaccaacgccatcttgggaaaacttggaagctgtgatgaaagca gtgaaaacggtggtgaaaggactggtggactttgttcagagcaatgggtcaaagaaggtg gacaacacagcttatgtcaatgtccgctacaaaacaagcatgtgtcgagatttgtccgag aaaggccgctgtccaaggggaactaactgtacatttgctcactcccaagaagaattggaa aagttcagagccagaaacaaaagatctggtagaaacgcttgttcagccagtgacacttct accttgaccgcaaaacagaaggtccaactagatcaaataacgaagacctcactggagaaa cagcgacagatgagtgttagttctgattgcgccatcagggatcagagattggcgaaagat ccaagctcagtgcccgtcatagctggaccacaggacattacccaggggatgaattccttg tctatggtagagcacatcaaaacgggggattctccatctatgtccggcccccatgtccac caacctagtgtcaactttcagaacatgccagcacaggcagtgcagccaaacgtcagctca atggtaccacctcagttccagatgtaccctaatgcccagttccacccaggcatggtacag cctggactctaccccaatggctcacaggtgcctgtgggtaatggagcggtgatgatgaac atgcagggggtgggctactcggatatgtatcagatggaagtcaacagaggttgtatgcag cacccatcaatcccctcgccatatcccatgatgcaacagccacagtatccaggggttcag tatcagcaatttgtgcctggctttttcccgccgagttacatcccttactctcagaatccg ggagggctgcaaccctttgtggattctcgagcgagctcatccatccagggtttgtacacc agcgagcccacattagtgtccacgtctgctccatcagttcaggaaaagggctacaggaat gagtccaaactccttcataatctgcacagcagaaggaaagagattttggctaaaattcag aacatgccatccagcagtgatgagatggagaccaattctctgctgacgggatgtaccccc tctagtccctctgtgagggacatcattaaggacccctacaagacagccagcgacaacttc atgttgtccaccaaatctaccctaaacaaagctgtcagcgacacagtcaatgccaacaca atcacctcattggctgaagtcactcacaaaattaacagttggaatcaagatcaggcctac ataccctggtctagtggtgacacagctctgtctgtgtggacatcatcaacggacaccaag gcgtcctcttcagaggtcctgacagacagcggcgacctgtggaatgagagtagttctgat agcacggacttcatgctgaactggttgaaggacatccccgatgacccagttccggtggag aacaaggaagaaaaatggtggctgaccactcccactttgtcagagccaatttacacatca gagtcggcagtgtatgcaaggtccactcattgtacgagtagtatgtcagtttgttctgac aaaactgatgaagagattccgtttgatccaccgattgtctcaaagtttgggccgatctca cggtcatgtaagacgaaatacaagtcaactgaccctgtgcaggctacggccaaccaggga ttttctgcgcggacgcctatgacagctaccacagcagtacggagacctcagaccacagcc tttcctcaggaaacaaaggtcaagaagaccccggaggtccccatgcagggctataatctc caagccattcccacaggatgttatgacaagtcagagatggggctgcaggactacgtctgt caggaactgtcccggctggagagacaggcccagaatgcctacacagagggagaggccctc aactgtgagctaaaggcagtagagctccagatatccctggaagatgggtccatgtttgaa actcctcatagcaaaccagaaaagacaatatttggatgggaattggagtcaaagttggag cgacccccagcagcttggagcagctttgaaatgttggcagcagccacaactaaaggaatg aagctggatgatatacacatggcattagatgctcagaaaaaagcaacacaaactctgcaa aggaaacagcaagaggactga

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