Magallana gigas (Pacific oyster): 105324607
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Entry
105324607 CDS
T03920
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105324607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105324607
04121 Ubiquitin system [BR:
crg04121
]
105324607
03036 Chromosome and associated proteins [BR:
crg03036
]
105324607
03400 DNA repair and recombination proteins [BR:
crg03400
]
105324607
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105324607
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105324607
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105324607
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105324607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_5
BRCT
Ank_3
BRCT_2
zf-RING_6
Ank_KRIT1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
105324607
NCBI-ProteinID:
XP_011422026
LinkDB
All DBs
Position
10:complement(19866716..19887808)
Genome browser
AA seq
655 aa
AA seq
DB search
MDNMNIQLFHQRLGELEKHLHCSVCNCIPDMPWVLGDCEHLYCRQCCDDLLGQCCVICGI
PVHVKDARMHRLVSNIVEQFKIMNRILQENFLVQESGIAKAGETTNCDFHTDHSNSSNNT
STNISSEFQYNLNDAAGSPELFGPDSPIKLSNHTDSPAKREQLEEASNLHARHVPETGEE
LAINLLFTGDNSSLSGNCQGTESKPVNKSNENIIQNCRTAARKINGAKQNIQFITRKKTI
KRSLKRSLGKENTHMSSPSSRKCSSTTPFQLGSPSHLNLSFNNVWQGSPHNIDKKNAKGE
TSLQVACIKGDLQRVERLLSSGANPNTRDHAGWTPLHEACQHGHAEIAARLLSAGALVDV
PGTENETPLHDAVRHLKTDCVTLLVRHGASINTRNINGLSPLDLSGGHSDLMEVLHTEVQ
GVITPLTLQVDPLVYQSPCFLGTGLSREQRSTLQKCASKLQARVVEGFCPEVTHVVSGCN
NEGLCPRTIKYLQGVLSGRWIVNMEWVEMSLEYGSKLVEEAFEIPGTSTDPQSGAAQKGR
INRQKQLPGLFDGCQFYFYGHFEYPTPDREDLVSLVKLGGGQVIQREPKPGHIPETQLTT
PYHAPAGSETCCIYIVHDNRAAFQPITTSVLCTVRAAWIMDCISQFRLINVGSDC
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggacaacatgaatatacaacttttccatcagagactgggggaattagaaaaacattta
cattgcagtgtgtgtaactgtataccagatatgccatgggtgctgggagactgtgaacac
ctttactgcagacaatgctgtgatgacctgctgggtcagtgctgtgttatttgtgggata
cctgtacacgtgaaggatgctcgtatgcacagactggtgtccaatattgtggaacagttc
aaaataatgaatcgcatcctccaagagaacttcttggtccaggaatcaggaatcgccaag
gcaggagagacgactaattgtgactttcatacggatcactcaaattcaagcaacaacaca
agtacaaacatttccagtgaatttcaatataatctgaatgatgctgcaggcagtccagaa
cttttcggtccagacagtcccatcaaactgtccaaccatacagattcccctgccaagaga
gaacaacttgaagaagcaagcaatctacatgcaagacatgttccagaaactggtgaggaa
ctggccatcaaccttttattcactggagacaattcttccttatctggcaattgtcaaggg
acagagtcaaaacctgtaaacaaaagcaatgagaatattatacagaactgtaggacagca
gctagaaaaatcaatggggccaagcaaaatatccagtttatcaccagaaagaaaacaatc
aaaagaagtttaaaaaggagtcttgggaaggagaatactcacatgtcatctccatcttcc
agaaagtgctcaagcaccaccccttttcaactaggtagccctagtcatttgaacttgtct
ttcaataatgtttggcaaggaagccctcacaacattgacaagaaaaatgccaagggggaa
acaagtcttcaagtggcatgtataaagggggatttgcagcgagtggaaagactgctatct
tctggagcaaatccaaacactcgagaccacgcaggatggacacctctgcatgaagcttgt
caacatggccatgcagagatagctgcgagacttttaagtgctggagcattggtagacgtt
ccaggtacagagaatgagactccactacatgacgctgtccgacatctgaagacagactgt
gtgactctgctggtcagacacggagcatctataaacacaagaaatattaacggactctcc
ccgttagacctgtctggtggtcactctgacttaatggaggttttacacactgaagtccaa
ggtgtgatcacccccctcacactacaggttgatccccttgtttaccagagtccatgtttc
cttggtacaggcttatctcgggagcagaggagtactctacagaagtgtgcctccaaacta
caggccagggtcgtggagggattttgtccagaggtgacccatgtagtgagtggctgtaac
aatgagggcctgtgtccccgcactatcaagtacttacaaggtgtactctctggccgatgg
atagtcaacatggaatgggtagaaatgagtcttgaatatggatcaaagctggtggaggag
gcgtttgagattccaggcaccagtaccgaccctcaatctggagcagctcaaaaagggcgg
atcaacagacagaaacagcttcctgggttatttgatgggtgccaattttacttctatgga
cactttgaataccccactccagatagagaggatctggtcagcctggtgaagttaggcggg
ggacaagtaatccagcgtgaacccaaacctggtcacatccccgagacacagctgaccaca
ccctaccacgcccccgcaggctccgagacttgctgtatatacattgtccatgacaacagg
gccgcattccagcccattacaacaagtgttttgtgtacagtgagggctgcatggataatg
gactgtatcagtcagttcagattgatcaatgttggctccgattgttga
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