Magallana gigas (Pacific oyster): 105324686
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Entry
105324686 CDS
T03920
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105324686
03041 Spliceosome [BR:
crg03041
]
105324686
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105324686
Spliceosome [BR:
crg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105324686
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_KHD4_2nd
KH_PARP10_1st
Motif
Other DBs
NCBI-GeneID:
105324686
NCBI-ProteinID:
XP_011422128
LinkDB
All DBs
Position
2:complement(28770551..28780206)
Genome browser
AA seq
707 aa
AA seq
DB search
MDAGGQGNSSHQAAFADAVARARQIAAKINQPGAGGGEGSQPLKRPFESDGNSYGEPDQK
KTVSAINDPIGAQLKALQEQQSRSEAAQAAQAAAARINQQLGVGPPSSAPPPAAPKPSSH
TGGGMVVTEEYAIPDKMVGLIIGKGGEQITRLQAETGCKIQIAPDGSGMPDRQCTLTGSS
GAIAACKQQIQDIIMRANQTGGPMMGGMDGNGGGFGGGGGGGGGGMGNGGGQTVVEMMVP
GNKVGLVIGKGGETIKQLQERAGVKMVMIQDSNIPSAAEKPLRISGDPQKCQRAKEMVLD
LLAEKEMENMNKGFNDYGSYGGGGGGGPPMEIPVPRTAVGIVIGKNGDMIKKIQQESGAK
VQFKADDGNSPERVCAIAGSPDKVQIAAQMIQELLNDYNQREGGMGRGFGGGRGRGGPGR
GRGGFGGGPGRGMGRGDGFGGFQDETQFAVPADKCGLVIGKGGETIRQINQQSGAHVELQ
KHPGPNPNEKLFNIKGGPDQIQHAIQMISEKAGIPYGGPGGPGMGGPGGPGPHGGPVPGG
PGYGDQYGGQYGAPGQQQGGQYGNGPQGGWGGYNQQQGYPQQQSGDPSQGGSDNKQAQDN
AAAWAAYYAQYYAQYGGYGGQYGQQQGQQQPQQPAQQSQAPQQQPASSQQNYAEPCKSIN
PATGQADYSAAWAEYYRQQGMHYQANMILQQAAAGQSGGAPQGQQPQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgggaggacagggtaattcgtcccatcaagcagcatttgcagacgccgttgcc
cgagcaagacagattgcagctaaaattaaccaaccaggggctggcggtggagagggatcc
cagccattaaaaagaccttttgaaagcgacggaaattcttacggtgaaccagaccaaaag
aagacagtgtctgcaattaatgaccctattggggcacagctaaaagctctccaagaacaa
caaagtcgaagtgaggccgcacaagcagcccaagcagcagccgccaggattaatcaacaa
ttaggagtcggccctccatcgtcagcccctcccccagcagctcctaaacccagctctcac
acaggaggaggtatggtggtcacagaagaatacgccatcccagacaagatggtcggcctg
ataattgggaaaggaggtgaacaaataacacggctacaagctgaaactggttgtaaaatt
cagattgccccagatggtagtggcatgccagaccgccagtgtactcttacaggttcctct
ggcgccattgctgcctgtaagcagcagattcaggacatcatcatgagagccaaccagact
ggtggcccaatgatggggggtatggatggaaatggtggtggctttggaggaggaggagga
ggaggtggtggtggcatggggaatggtggaggccagacagtggtagagatgatggtccca
ggcaacaaagtcgggctagtcattggaaaaggaggagaaaccattaaacagctgcaggag
agagctggagtcaaaatggtgatgattcaagatagcaacatcccatcagccgctgaaaaa
ccgctgagaatctctggagatccacagaaatgtcagagggcaaaggaaatggttctagac
ctgcttgctgaaaaggaaatggagaacatgaataagggattcaatgactatggatcctat
ggtggtggtggtggaggtggtccccccatggagattcctgtgccaagaacagctgtagga
attgttattggcaaaaatggagacatgatcaaaaagattcaacaagagagtggagccaag
gttcagttcaaggctgatgatggaaatagcccagaaagagtatgtgccattgcggggtca
cctgacaaagtacagatagctgcccagatgatccaggaactcctgaatgattacaatcaa
agagaaggtggaatgggtcgtggctttggaggcggtagaggtcgcggcgggcctggtaga
ggtcgtggcggctttggaggtggtcctggtagaggaatgggccgtggggatggatttgga
ggatttcaggatgagactcagtttgctgtccctgctgacaagtgtggattggttattgga
aaaggtggtgaaactatccgtcagataaaccaacagtctggggcacatgttgaacttcag
aaacatcctggtcctaaccctaatgagaagttgtttaacatcaaaggaggtcctgatcaa
attcagcatgctattcagatgatcagtgagaaagcaggaataccctatggaggtccaggt
gggccaggtatgggtggccctgggggtccaggacctcatgggggaccagttccaggaggc
ccggggtatggggatcaatatggaggacagtatggagcacctggtcagcagcaagggggg
cagtatggaaatggtccacagggtggctggggaggatacaatcagcaacaaggatacccc
cagcagcagtccggggacccaagtcagggtggttcagacaataaacaggcccaggacaat
gctgcagcatgggcagcatattatgcccagtattatgctcagtatggaggatatggaggg
cagtatggtcagcaacagggacaacagcagccccagcaacctgctcagcagtctcaagca
ccgcagcaacagccagcatcatcccaacagaattatgctgaaccgtgtaagtcaattaac
cctgccaccggtcaagcagattacagcgcagcctgggccgagtactacagacaacaggga
atgcattaccaggccaacatgatcttacagcaagctgcagcagggcagtctgggggagcc
ccacagggacagcagccccagtag
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integrated database retrieval system
