Magallana gigas (Pacific oyster): 105324771
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Entry
105324771 CDS
T03920
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04145
Phagosome
crg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105324771
09142 Cell motility
04814 Motor proteins
105324771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105324771
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crg04812
]
105324771
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
105324771
Cytoskeleton proteins [BR:
crg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
105324771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML
WD40
Dynein_IC2
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_EIPR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_BBS7
Beta-prop_SPT8
DUF5104
Motif
Other DBs
NCBI-GeneID:
105324771
NCBI-ProteinID:
XP_034316583
LinkDB
All DBs
Position
5:55528026..55547635
Genome browser
AA seq
713 aa
AA seq
DB search
MADRKAELERKKLKLEQMRKEREEKNRQRKVKEGGEEKKVAPTSSGQSQDLRAQTDELLS
SLGIPPASGNDSQAVVQPVKETVGPNEGAPATSAVTTQQASRRKAKLTVTKVGETNIPPR
ENVTYSKETQTIVVDTTEKEGHRFGARGPWDYYDDHSDDTCSLSSLVRGASSRLSSPRHS
NSSPHHGSPRFTHHDMEWEDEFEFYDEVLTYDDPRGHSDEDTDSIDVHPAPTHHKMPHVE
NVHPTLTQEDIQKQEEKPSAPATKDFPVTMVKKVIELSEEEKKQIMMTEEFQTFFNKTTR
VVERALDEEIDIFVDYAGGESEDMESDLRAGERLKLQRNFFDERWSKHRTVTSLDWSKQH
PELLVASYNANEDSPNDPDGVTLIWNSKFKKTTPEYVFHCQSPVMSSCFAEFHPNLVVGG
TYSGQIVLWDNRVNKRTPIQRTPLSAAAHTHPVYCINVVGTQNAHNLISVSTDGKMCSWS
LDMLSQPQDSMELQHKQSKAVAVTCFSFLSGDVNNFVVGSEDCTVYTACRHGGKTGISEA
FEGHMGPITGIDCHNVPGQIDFSPYFLTSSFDWTLKLWSIKDQKFLHSFEDNSDYVYDVQ
WSPIHPALFASVDGDGRLDLWNLNNETEVPTASVVAEGGVALNHCRWHGSGSSIAVGDDV
GRIHIYDVAENTANPKMDEWSRFVRTLQELKQQAVEREEESSLGSVSMTSPLR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagaaaggccgagcttgagaggaagaagctcaaactagagcaaatgaggaaa
gaaagagaggagaaaaatcgacagcgaaaagtgaaagagggtggggaagaaaagaaggtt
gccccgacaagtagcggtcagtcccaagatctgcgggcccagaccgatgagctgttatcc
agtttaggaatcccccctgcatcagggaatgattctcaggctgtggtacaaccagtcaag
gagacagtaggccccaatgaaggggcacctgctacttctgcagttaccactcaacaagca
agtcgtcggaaagccaaattaacggtgacaaaggttggagaaacaaacattccacctcgt
gaaaatgtgacctacagcaaagagacccagactatagtagtagataccacagagaaagaa
ggccatagatttggagcccgagggccatgggattattacgatgatcactctgacgataca
tgtagtttatccagtcttgtcaggggtgcgtcctctcgcctgagttcacctcgtcatagc
aactcctccccccatcatggatccccccgattcacacaccatgatatggaatgggaggat
gaatttgagttttatgacgaagttcttacttatgacgaccctcgtggtcactcagatgag
gacacagactccattgatgtccaccccgcccccactcaccacaagatgccccacgtggag
aatgtacacccgacgctgacccaggaggacatccagaaacaggaagaaaaaccaagtgca
ccagctacaaaagattttccagtcaccatggtcaaaaaagttattgagctgagcgaggag
gagaaaaaacagattatgatgacagaagagttccaaaccttcttcaataagacaacgcgg
gtcgtggagcgagctctcgacgaggagatcgatatatttgtggattacgcgggtggagag
tcagaagatatggagagtgatttgcgggctggagagagactgaagctccagaggaacttc
tttgatgagcgatggtctaagcaccggactgtgaccagtctggactggtccaaacagcat
ccagagttgttggtggcatcctacaatgctaacgaggattctcctaatgaccctgatgga
gttacccttatctggaactccaaattcaaaaagaccactcctgaatatgtcttccattgc
cagtcgcccgtgatgtcgagctgttttgcggagttccaccctaaccttgtggttggagga
acctactctggtcagattgtgctgtgggacaatcgggtcaacaagagaacccccatccag
cggacccccctctctgccgctgcccacacgcaccctgtatactgtatcaatgtggtgggc
acccagaacgcccacaacttgatcagtgtgtccacggacggaaagatgtgttcatggagc
ctggacatgctctcacagccacaggacagcatggagctccagcacaagcagagtaaggcg
gtggctgtcacctgtttctccttcctgtccggcgacgtcaataactttgtggtcggcagt
gaggattgtactgtgtacactgcctgtagacacggcgggaaaacaggtattagtgaggcc
tttgagggacacatggggcccatcacggggatagactgccacaatgttcctggacaaatc
gacttctccccgtactttctaacctccagttttgattggacactcaaactctggagcatc
aaagaccagaagttcctgcactcttttgaggacaacagtgactatgtttatgacgtccag
tggtcaccgatccaccccgccctgtttgccagcgtggacggagatggtcgtctggatctg
tggaacctgaacaatgagactgaggtgcccactgcgtcagttgtagcagaagggggcgtg
gcactcaatcactgtcgctggcatgggagtggatccagcatcgctgttggtgacgatgtc
ggacgaattcatatttatgatgtagcggagaacactgcaaacccaaagatggatgagtgg
tcgcgcttcgttagaactctgcaggaattgaagcaacaagcagtggagcgtgaagaggag
tcatctctcggatcggtatccatgacctccccactacgatga
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