Magallana gigas (Pacific oyster): 105324884
Help
Entry
105324884 CDS
T03920
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105324884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105324884
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
105324884
Prokaryotic type
Archaeal type
TFB
105324884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
105324884
NCBI-ProteinID:
XP_011422417
LinkDB
All DBs
Position
2:complement(43687525..43695370)
Genome browser
AA seq
322 aa
AA seq
DB search
MDNKAALRNYRKLQPQIFCTEHPDAPLVEDYHAGDMICPECGLVVGDRVVDVGTEWRTFS
NDKSDKDPSRVGASENPLLEGGDLSTMIATGVGGSEGVLDEHGKPMYRNRRTLNSSDRAL
INAFREIGQMGDRLNLPRMIADRANTLFKQVHEGKALKGRSNDAIASACMYIACRQEGVP
RTFKEICAVSKISKKEIGRVFKLILKNLETNVELITTGDFMSRFCSNLSLPNSVQKAATH
IARKAVDLDLTPGRSPISVAAAAIYMASQASADKKSQKEIGDIAGVAEVTIRQSYKLMYP
KAHLLFPEDFDFVTPIEQLPAQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaaagccgctttacgaaattacaggaagctgcagccccagattttctgcacc
gagcatccagatgcccctcttgtggaggattatcatgcgggggacatgatctgcccagag
tgtggcctggttgtaggcgacagagtagtggatgttggaactgagtggagaactttcagt
aatgacaaatcggacaaggatccgtctcgtgttggagcctcagaaaatcctttgcttgag
ggtggggacctgtctacaatgatagctacaggagttggaggctcggagggcgtgttagac
gaacatggcaaaccgatgtacagaaaccggcggacactgaacagttcagacagagcactg
atcaatgcattcagagaaattggacaaatgggagacaggttaaacctaccaagaatgatt
gctgatagagccaacactttatttaaacaagtgcatgaaggaaaagctttgaaaggacgc
agtaatgatgctattgcctcagcgtgtatgtatatagcatgtcgtcaggaaggggttcca
aggacattcaaagaaatttgtgctgtctcaaaaatctccaaaaaggagattggtagggta
tttaagctgatcttgaagaatctggaaacaaatgtagagttgattactacaggagatttc
atgtcgcgcttctgctccaatctgagtttaccaaactctgtacagaaggcagcgacacac
attgcccgtaaagcagtggatctggatctgactcctggtcgtagtccaatttctgtggct
gctgctgcaatatacatggcttcccaagcttctgcagacaaaaagtcccagaaagagatt
ggagacatagccggagtggctgaagtaacgatccgacagtcctacaaactgatgtatccc
aaagctcacctcttgttcccagaggactttgattttgtcacccccatagagcagctccca
gctcagtga
DBGET
integrated database retrieval system
