Magallana gigas (Pacific oyster): 105324935
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Entry
105324935 CDS
T03920
Name
(RefSeq) chitobiase
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00511
Other glycan degradation
crg00513
Various types of N-glycan biosynthesis
crg00520
Amino sugar and nucleotide sugar metabolism
crg00531
Glycosaminoglycan degradation
crg00600
Sphingolipid metabolism
crg00603
Glycosphingolipid biosynthesis - globo and isoglobo series
crg00604
Glycosphingolipid biosynthesis - ganglio series
crg01100
Metabolic pathways
crg04142
Lysosome
Module
crg_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
105324935
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
105324935
00513 Various types of N-glycan biosynthesis
105324935
00531 Glycosaminoglycan degradation
105324935
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
105324935
00604 Glycosphingolipid biosynthesis - ganglio series
105324935
00511 Other glycan degradation
105324935
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105324935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
crg03110
]
105324935
Enzymes [BR:
crg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
105324935
Chaperones and folding catalysts [BR:
crg03110
]
Intramolecular chaperones
Others
105324935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
105324935
NCBI-ProteinID:
XP_034306662
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All DBs
Position
4:complement(26693587..26700571)
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AA seq
859 aa
AA seq
DB search
MDQSQLDQIADKLDIRYSVLDNLKDGKSTYRSQIVITNESDIPLDYKSNWKIYFCHIRMV
EPGSLPKHNHAELKKEGIRFSHVNGCLFTLEPLKNFTTLKKDESITIKFKCQYYCVARTD
LLPNWYIVAGKLEPRIIKCTSDSGLSFVQPFDKPEKWKRFHYKQENGVMRVDKYNPYTPE
ERFKRNAVEDLGKPGSLVLPTPAKATYLLEKAAALSVDQFTIFSDKELENEALFLKDKLG
SETKISNDISSVPSSKFNAITLRLKDTKDDHSLSSSYKLSVNPEIPSISVEASDPSGAFY
GIQSLLALLENEKVPTTEIEDYPRFPYRGMHLDVSRNFHGKHQIMKLLDIMAKYKMNKFH
FHLTDDEGWRLEIPGLEELTEVGSKRGHDLTERTCILPMLGSGPHLTSSGTGFYTVEDYQ
EILRYAKQRHIEVIPEIDMPGHSHAAIMAMKARYYKYKKTGDTEKAKEFLLCSVDDSLHA
QSVQMYSENSMDPGLDSTYRFVDKVVAEVQKIHEPVAPLRTFHFGGDEVPYETWEDSEAC
IALVKDKKVKGFSKLMEYFVKRVAKIVAKHDLVMGAWQDGVIHDEVFLEPVERKEFPNKE
VHVYTWQNVWESGLSGCAYRLANNGYKVVMAQGTHLYFDHPYEPDPEERGLYWACRFCDT
RKTFGFMPDNIYANADVKLSGDPISMEDLLSKHPEDHDPLKKHENILGMQGHLWTELVRT
SDEMDAMIFPRLLAVAERSWHKASWEDVENSSSRKARMNKDWTMFANTLGYRELKVLDRM
GVAYHLTPPGARIVKGELEMNAVYPGLPLFYSLDDGESWLQYKTKVKVDVKSGIKLMSKS
ADGKRESRVVVLDPNTRED
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtcgcagctggatcagattgcagataaattggacataaggtattcggttctt
gacaatcttaaagatgggaaatccacatacagatctcaaattgtcatcactaacgagtcg
gatattccgctggattacaaatccaactggaaaatctacttttgccacatccgaatggtg
gagccaggctcgcttccaaagcacaaccacgcagagctcaaaaaagagggcattagattc
tcacatgttaatgggtgcttgtttacactggaacctttgaagaattttaccacactgaag
aaagatgagagcattacaattaagttcaagtgtcagtattattgtgtagcaaggacagat
ttattacctaattggtacattgtggccggaaaactagaaccacgcattattaaatgcaca
agcgactcgggcctgagtttcgtgcagccctttgataagccggaaaaatggaagagattt
cactataaacaagagaatggggtaatgagagtagacaagtataacccatatacgccagaa
gaaaggtttaagaggaatgcagtggaggatcttgggaaacctggttcgctagttttacca
acgcctgccaaggctacctatcttttggagaaagctgctgccctatcagtagatcagttt
acaatttttagtgataaagagttagaaaatgaagctctttttttaaaagacaagctagga
tcagagaccaaaatttccaatgacatttcctcagtaccatcatcaaaatttaatgctatt
actctgagactgaaggacactaaagatgaccacagtctctcctcttcctacaaactctct
gttaaccctgagatcccaagcatcagcgttgaggccagcgacccttcaggagcattttac
ggcatccagtcgttgcttgccttactggaaaatgaaaaagtacccacaacagaaatagag
gactatcccaggtttccctaccgaggtatgcatctggatgtgtcccggaatttccatggg
aaacaccagatcatgaagctgctagacatcatggctaaatataaaatgaacaagttccat
ttccaccttactgatgacgagggatggagactggaaattccagggctggaggaactcaca
gaggttgggagcaaaagaggtcatgacctcacagagagaacttgtattttacctatgcta
ggttcagggcctcacttaacttcctcagggacggggttctacactgtggaagactatcag
gaaattctcaggtacgccaaacagaggcacatagaggtgatcccagagattgatatgcca
ggtcatagtcatgcagccattatggccatgaaggccaggtactacaagtacaaaaagact
ggtgacaccgaaaaagccaaagagttcttgctgtgtagtgtggacgactccttgcatgcc
caatccgtgcagatgtattcagagaattccatggatccaggattagactccacctacagg
tttgtggataaagtggtagctgaggtgcaaaagatacacgagccggtggcacccttgcgg
acatttcatttcggtggtgacgaggttccgtacgagacctgggaagattcggaggcctgt
attgctctagtgaaggataagaaagttaaaggcttctccaaactgatggaatactttgtg
aaacgtgtggctaagatcgtggccaagcacgacctagtgatgggggcgtggcaggacgga
gtgatccacgatgaggtgtttctagagccagtggagaggaaggagttcccgaacaaagag
gtgcatgtgtacacctggcagaacgtttgggagtcgggcctgtctggttgtgcctaccga
ctggccaacaatggctataaagttgtgatggcccagggcactcacttatattttgaccac
ccttatgagcctgaccccgaagagaggggactgtactgggcatgtagattctgtgacacc
agaaagacttttggcttcatgccagataacatctacgctaatgcagatgtgaaactatct
ggggacccaatcagcatggaggatttgttatccaaacaccctgaggaccacgatcccctg
aaaaagcatgaaaatattttaggaatgcaaggacacttgtggactgaactagttaggacc
tcagatgaaatggatgccatgattttcccccgtctgcttgcggtcgccgaaaggtcctgg
cacaaagcgtcatgggaagacgtcgaaaatagctcctccagaaaggccaggatgaacaag
gactggaccatgtttgccaatacactaggctacagagaactcaaggtgctagacagaatg
ggagtggcctatcacctgacacctccaggggccagaattgtgaaaggagagctagaaatg
aatgcagtgtatccaggtcttccactcttctacagtctggatgatggcgagtcatggctg
cagtacaaaacaaaagtgaaagtagatgtaaagtcaggaatcaaattgatgtcaaagtcg
gcagatggtaagagagaaagcagagtcgtagttctggacccgaacacaagggaagactga
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