Magallana gigas (Pacific oyster): 105325000
Help
Entry
105325000 CDS
T03920
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105325000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105325000
03012 Translation factors [BR:
crg03012
]
105325000
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105325000
Translation factors [BR:
crg03012
]
Eukaryotic type
Release factors
105325000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
105325000
NCBI-ProteinID:
XP_011422618
UniProt:
K1PX23
LinkDB
All DBs
Position
8:23532187..23541943
Genome browser
AA seq
443 aa
AA seq
DB search
MASNGVDGESSADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRIAKMLADEF
GTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVIYCGTIVTDEGKEKKVNIDFEP
FRPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLSGNTREVLHKFTVDL
PKKHGRGGQSALRFARLRMEKRHNYVRKVAEVAVQLFISNDKPNIAGLVLAGSADFKTEL
SQSDMFDPRLQGKIIKIVDVSYGGENGFNQAIELSSDSLANVKFIQEKKLIGRYFDEISQ
DTGKYCFGVDDTLKALEMGAVDILIVWENLDVTRYVLKNHATDVENILFLRPEQEKDKTH
FIDKDTGVELELSEQMPLLEWFANNYKNFGATLEIITDKSQEGAQFVRGFGGIGGILRYQ
IDFQVLSGQVFDELDDDFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaatggtgtagatggggaaagcagtgcggaccgaaatgttgaaatatggaag
atcaagaaacttattaagagtttggaagcagctagaggaaatggcacaagtatgatatct
ttaatcattccaccaaaggatcaaatctctagaatcgccaaaatgttagctgatgaattt
ggaacagcttcaaatatcaaaagtcgtgtgaacagactctcagtattgggagctattaca
tcggtacaacaacggttaaaactttacaacaaagtcccacccaatggtttggtgatatat
tgtggtaccatagtgacagatgaaggaaaggaaaagaaagttaacatagactttgaacca
ttcagacccattaatacatccctgtatttatgtgataacaaattccacacagaggcttta
acagccctgttagcagatgacaacaagtttggttttatcgtgatggatggtaatggagct
ctgtttggaacactatcaggaaacaccagagaagtcctacacaaatttacagtcgattta
cccaagaaacacgggagaggaggtcagtcagctttacgttttgcccgtttacgtatggag
aagcgtcacaactatgtgagaaaagtggctgaggttgcagtacaactgttcatatccaac
gacaaaccaaacattgctggtctggtgctagctggatccgcagatttcaaaacagaactc
agtcagtctgacatgtttgatcctagattgcaaggcaagatcatcaagattgttgatgta
tcatatggaggggaaaatggtttcaaccaggcaatagaactgtcttcagattcactagcg
aacgttaaattcatacaggaaaagaaactcataggtcgttattttgacgagatctcacaa
gacacggggaaatactgctttggtgtggacgacacgctaaaggctttagagatgggagca
gtggatattctcattgtttgggaaaatttggacgtcacacgctatgtgctgaagaaccat
gcgacagatgtggagaatattctgttccttcgaccagagcaggagaaagacaaaacacat
ttcattgataaggatactggagtggaactggaattatcagaacagatgcctttattagaa
tggtttgcaaataactacaaaaacttcggtgccaccttagaaatcattacagacaagtca
caagaaggagcacagtttgtgcgaggattcggaggaattggaggaatattgcggtatcag
atagactttcaagtattatcaggacaggtgtttgacgaattggatgacgactttgatcta
gatgactattga
DBGET
integrated database retrieval system
